List of
Imperfect Penta
-nucleotide repeats in Ashbya gossypii ATCC 10895
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_005784 | AAAAT | 3 | 56828 | 56841 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NC_005784 | GCTGA | 3 | 94014 | 94027 | 14 | 20.00% | 20.00% | 40.00% | 20.00% | 302306860 |
| 3. | NC_005784 | CAACT | 3 | 96305 | 96318 | 14 | 40.00% | 20.00% | 0.00% | 40.00% | 45185544 |
| 4. | NC_005784 | ACCGC | 3 | 113413 | 113426 | 14 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |
| 5. | NC_005784 | ACCTG | 3 | 123829 | 123842 | 14 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 6. | NC_005784 | CGGTG | 3 | 135572 | 135587 | 16 | 0.00% | 20.00% | 60.00% | 20.00% | 45185568 |
| 7. | NC_005784 | TATTG | 3 | 166398 | 166411 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 8. | NC_005784 | TGCCC | 3 | 217908 | 217921 | 14 | 0.00% | 20.00% | 20.00% | 60.00% | 45185613 |
| 9. | NC_005784 | ATAGA | 3 | 238292 | 238305 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 10. | NC_005784 | CCCCG | 3 | 260812 | 260825 | 14 | 0.00% | 0.00% | 20.00% | 80.00% | 45185629 |
| 11. | NC_005784 | GGCGC | 3 | 262067 | 262080 | 14 | 0.00% | 0.00% | 60.00% | 40.00% | 302306919 |
| 12. | NC_005784 | AAGAA | 3 | 297129 | 297143 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 13. | NC_005784 | ATGAG | 3 | 332598 | 332612 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 14. | NC_005784 | ATAAA | 4 | 357675 | 357694 | 20 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 15. | NC_005784 | TTATG | 3 | 375121 | 375134 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | 45185697 |
| 16. | NC_005784 | TCGAG | 3 | 403334 | 403347 | 14 | 20.00% | 20.00% | 40.00% | 20.00% | 45185712 |
| 17. | NC_005784 | CTCAT | 3 | 403923 | 403937 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 18. | NC_005784 | CTCTT | 3 | 406588 | 406601 | 14 | 0.00% | 60.00% | 0.00% | 40.00% | 302306968 |
| 19. | NC_005784 | AGCGG | 3 | 436447 | 436460 | 14 | 20.00% | 0.00% | 60.00% | 20.00% | 45185730 |
| 20. | NC_005784 | AAGCC | 3 | 457177 | 457190 | 14 | 40.00% | 0.00% | 20.00% | 40.00% | 302306991 |
| 21. | NC_005784 | CTTTT | 3 | 476820 | 476834 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 22. | NC_005784 | TTCAA | 3 | 492673 | 492687 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 23. | NC_005784 | TTCGC | 4 | 511241 | 511260 | 20 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 24. | NC_005784 | GCTGG | 3 | 560351 | 560365 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | Non-Coding |
| 25. | NC_005784 | TGCGG | 3 | 580134 | 580147 | 14 | 0.00% | 20.00% | 60.00% | 20.00% | 45185818 |
| 26. | NC_005784 | GAGAT | 3 | 589915 | 589929 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 27. | NC_005784 | GAATC | 3 | 642858 | 642871 | 14 | 40.00% | 20.00% | 20.00% | 20.00% | 302307065 |
| 28. | NC_005784 | GCTTT | 3 | 652372 | 652386 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | 45185854 |
| 29. | NC_005784 | GGCGC | 4 | 692306 | 692324 | 19 | 0.00% | 0.00% | 60.00% | 40.00% | Non-Coding |
| 30. | NC_005784 | AATGC | 3 | 696660 | 696674 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | 45185883 |
| 31. | NC_005784 | GCCCT | 3 | 721589 | 721603 | 15 | 0.00% | 20.00% | 20.00% | 60.00% | 302307090 |
| 32. | NC_005784 | GCCCC | 3 | 725848 | 725861 | 14 | 0.00% | 0.00% | 20.00% | 80.00% | 45185900 |
| 33. | NC_005784 | GGCGC | 4 | 731096 | 731114 | 19 | 0.00% | 0.00% | 60.00% | 40.00% | 45185903 |
| 34. | NC_005784 | AGTAA | 3 | 805613 | 805626 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 35. | NC_005784 | TGTTG | 3 | 875118 | 875131 | 14 | 0.00% | 60.00% | 40.00% | 0.00% | 302307125 |
| 36. | NC_005784 | GCTGC | 3 | 876286 | 876299 | 14 | 0.00% | 20.00% | 40.00% | 40.00% | 302307125 |
| 37. | NC_005784 | GAACG | 3 | 877219 | 877232 | 14 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 38. | NC_005784 | CGAGA | 3 | 881700 | 881713 | 14 | 40.00% | 0.00% | 40.00% | 20.00% | 302307127 |