ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

Mitochondria Motifs - Perfect TCT Repeats

S.No	Sequence ID	Motif	Iterations	Start	End	Tract Length	Sequence Name
1	NC_014050	TCT	7	963853	963873	21	Cucurbita pepo mitochondrion
2	NC_013839	TCT	6	28712	28729	18	Candida sojae mitochondrion
3	NC_014050	TCT	6	567480	567497	18	Cucurbita pepo mitochondrion
4	NC_016006	TCT	6	25781	25798	18	Cucumis sativus mitochondrion chromosome 3
5	NC_018365	TCT	6	13570	13587	18	Lentinula edodes mitochondrion
6	NC_008331	TCT	5	485163	485177	15	Zea perennis mitochondrion
7	NC_014050	TCT	5	445309	445323	15	Cucurbita pepo mitochondrion
8	NC_014050	TCT	5	645515	645529	15	Cucurbita pepo mitochondrion
9	NC_014050	TCT	5	713387	713401	15	Cucurbita pepo mitochondrion
10	NC_014050	TCT	5	778323	778337	15	Cucurbita pepo mitochondrion
11	NC_014050	TCT	5	784914	784928	15	Cucurbita pepo mitochondrion
12	NC_014050	TCT	5	835887	835901	15	Cucurbita pepo mitochondrion
13	NC_014050	TCT	5	857377	857391	15	Cucurbita pepo mitochondrion
14	NC_014050	TCT	5	940747	940761	15	Cucurbita pepo mitochondrion
15	NC_016005	TCT	5	1339639	1339653	15	Cucumis sativus mitochondrion chromosome 1
16	NC_016005	TCT	5	1410445	1410459	15	Cucumis sativus mitochondrion chromosome 1
17	NC_016005	TCT	5	1466617	1466631	15	Cucumis sativus mitochondrion chromosome 1
18	NC_016171	TCT	5	5799	5813	15	Silene noctiflora mitochondrion chromosome 14
19	NC_016222	TCT	5	53337	53351	15	Silene conica mitochondrion chromosome 64
20	NC_016291	TCT	5	20935	20949	15	Silene conica mitochondrion chromosome 71
21	NC_016724	TCT	5	2024	2038	15	Libythea celtis mitochondrion
22	NC_019996	TCT	5	2025	2039	15	Choristoneura longicellana mitochondrion
23	NC_020370	TCT	5	3964	3978	15	Ministeria vibrans mitochondrion
24	NC_020428	TCT	5	2008	2022	15	Delias hyparete mitochondrion
25	NC_021127	TCT	5	28587	28601	15	Jakoba libera strain ATCC 50422 mitochondrion
26	NC_021152	TCT	5	218820	218834	15	Liriodendron tulipifera mitochondrion
27	NC_021152	TCT	5	218856	218870	15	Liriodendron tulipifera mitochondrion
28	NC_010782	TCT	5	2795	2809	15	Uroctonus mordax mitochondrion
29	NC_013580	TCT	5	1984	1998	15	Acmaeodera sp. NCS-2009 mitochondrion
30	NC_002511	TCT	4	303716	303727	12	Beta vulgaris subsp. vulgaris mitochondrion
31	NC_007579	TCT	4	197940	197951	12	Triticum aestivum mitochondrion
32	NC_007579	TCT	4	411758	411769	12	Triticum aestivum mitochondrion
33	NC_007935	TCT	4	24267	24278	12	Paracoccidioides brasiliensis mitochondrion
34	NC_007935	TCT	4	58891	58902	12	Paracoccidioides brasiliensis mitochondrion
35	NC_007982	TCT	4	211051	211062	12	Zea mays subsp. mays mitochondrion
36	NC_008331	TCT	4	35595	35606	12	Zea perennis mitochondrion
37	NC_008331	TCT	4	267684	267695	12	Zea perennis mitochondrion
38	NC_008332	TCT	4	56414	56425	12	Zea mays subsp. parviglumis mitochondrion
39	NC_008332	TCT	4	564227	564238	12	Zea mays subsp. parviglumis mitochondrion
40	NC_008362	TCT	4	280812	280823	12	Tripsacum dactyloides mitochondrion
41	NC_008742	TCT	4	14403	14414	12	Capitulum mitella mitochondrion
42	NC_011325	TCT	4	5790	5801	12	Cantherhines pardalis mitochondrion
43	NC_012116	TCT	4	464229	464240	12	Carica papaya mitochondrion
44	NC_012119	TCT	4	771527	771538	12	Vitis vinifera mitochondrion
45	NC_012651	TCT	4	42946	42957	12	Megaceros aenigmaticus mitochondrion
46	NC_014050	TCT	4	59295	59306	12	Cucurbita pepo mitochondrion
47	NC_014050	TCT	4	127960	127971	12	Cucurbita pepo mitochondrion
48	NC_014050	TCT	4	374186	374197	12	Cucurbita pepo mitochondrion
49	NC_014050	TCT	4	426943	426954	12	Cucurbita pepo mitochondrion
50	NC_014050	TCT	4	465053	465064	12	Cucurbita pepo mitochondrion
51	NC_014050	TCT	4	821011	821022	12	Cucurbita pepo mitochondrion
52	NC_014342	TCT	4	14647	14658	12	Oratosquilla oratoria mitochondrion
53	NC_014492	TCT	4	11596	11607	12	Caprella mutica mitochondrion
54	NC_014505	TCT	4	350	361	12	Tanystylum orbiculare mitochondrion
55	NC_015099	TCT	4	219588	219599	12	Beta vulgaris subsp. maritima mitochondrion
56	NC_015121	TCT	4	80631	80642	12	Vigna radiata mitochondrion
57	NC_015316	TCT	4	52400	52411	12	Coccomyxa sp. C-169 mitochondrion
58	NC_015652	TCT	4	6228	6239	12	Pleuragramma antarctica mitochondrion
59	NC_015654	TCT	4	6233	6244	12	Chaenocephalus aceratus mitochondrion
60	NC_015751	TCT	4	12578	12589	12	Myleus sp. NM-2010 mitochondrion
61	NC_015791	TCT	4	8864	8875	12	Triturus dobrogicus mitochondrion
62	NC_015994	TCT	4	219505	219516	12	Beta macrocarpa mitochondrion
63	NC_016004	TCT	4	25175	25186	12	Cucumis sativus mitochondrion chromosome 2
64	NC_016005	TCT	4	34488	34499	12	Cucumis sativus mitochondrion chromosome 1
65	NC_016005	TCT	4	59765	59776	12	Cucumis sativus mitochondrion chromosome 1
66	NC_016005	TCT	4	286170	286181	12	Cucumis sativus mitochondrion chromosome 1
67	NC_016005	TCT	4	310769	310780	12	Cucumis sativus mitochondrion chromosome 1
68	NC_016005	TCT	4	501483	501494	12	Cucumis sativus mitochondrion chromosome 1
69	NC_016005	TCT	4	779336	779347	12	Cucumis sativus mitochondrion chromosome 1
70	NC_016005	TCT	4	829224	829235	12	Cucumis sativus mitochondrion chromosome 1
71	NC_016005	TCT	4	1014399	1014410	12	Cucumis sativus mitochondrion chromosome 1
72	NC_016005	TCT	4	1057466	1057477	12	Cucumis sativus mitochondrion chromosome 1
73	NC_016005	TCT	4	1077953	1077964	12	Cucumis sativus mitochondrion chromosome 1
74	NC_016005	TCT	4	1116307	1116318	12	Cucumis sativus mitochondrion chromosome 1
75	NC_016005	TCT	4	1119089	1119100	12	Cucumis sativus mitochondrion chromosome 1
76	NC_016005	TCT	4	1122267	1122278	12	Cucumis sativus mitochondrion chromosome 1
77	NC_016005	TCT	4	1175824	1175835	12	Cucumis sativus mitochondrion chromosome 1
78	NC_016005	TCT	4	1260330	1260341	12	Cucumis sativus mitochondrion chromosome 1
79	NC_016005	TCT	4	1285814	1285825	12	Cucumis sativus mitochondrion chromosome 1
80	NC_016005	TCT	4	1316428	1316439	12	Cucumis sativus mitochondrion chromosome 1
81	NC_016005	TCT	4	1331864	1331875	12	Cucumis sativus mitochondrion chromosome 1
82	NC_016006	TCT	4	5205	5216	12	Cucumis sativus mitochondrion chromosome 3
83	NC_016061	TCT	4	8911	8922	12	Equus hemionus mitochondrion
84	NC_016211	TCT	4	38483	38494	12	Silene conica mitochondrion chromosome 107
85	NC_016212	TCT	4	89718	89729	12	Silene conica mitochondrion chromosome 5
86	NC_016219	TCT	4	57733	57744	12	Silene conica mitochondrion chromosome 27
87	NC_016228	TCT	4	64599	64610	12	Silene conica mitochondrion chromosome 14
88	NC_016235	TCT	4	112319	112330	12	Silene conica mitochondrion chromosome 7
89	NC_016236	TCT	4	10278	10289	12	Silene conica mitochondrion chromosome 55
90	NC_016253	TCT	4	39740	39751	12	Silene conica mitochondrion chromosome 50
91	NC_016254	TCT	4	65242	65253	12	Silene conica mitochondrion chromosome 60
92	NC_016258	TCT	4	41594	41605	12	Silene conica mitochondrion chromosome 53
93	NC_016265	TCT	4	26561	26572	12	Silene conica mitochondrion chromosome 77
94	NC_016266	TCT	4	5960	5971	12	Silene conica mitochondrion chromosome 80
95	NC_016268	TCT	4	41617	41628	12	Silene conica mitochondrion chromosome 84
96	NC_016270	TCT	4	25571	25582	12	Silene conica mitochondrion chromosome 21
97	NC_016271	TCT	4	44973	44984	12	Silene conica mitochondrion chromosome 78
98	NC_016272	TCT	4	34149	34160	12	Silene conica mitochondrion chromosome 8
99	NC_016276	TCT	4	31720	31731	12	Silene conica mitochondrion chromosome 74
100	NC_016278	TCT	4	32168	32179	12	Silene conica mitochondrion chromosome 10
101	NC_016278	TCT	4	40402	40413	12	Silene conica mitochondrion chromosome 10
102	NC_016279	TCT	4	62464	62475	12	Silene conica mitochondrion chromosome 52
103	NC_016284	TCT	4	73173	73184	12	Silene conica mitochondrion chromosome 65
104	NC_016291	TCT	4	20026	20037	12	Silene conica mitochondrion chromosome 71
105	NC_016292	TCT	4	11960	11971	12	Silene conica mitochondrion chromosome 124
106	NC_016302	TCT	4	46210	46221	12	Silene conica mitochondrion chromosome 32
107	NC_016309	TCT	4	41026	41037	12	Silene conica mitochondrion chromosome 120
108	NC_016320	TCT	4	38513	38524	12	Silene conica mitochondrion chromosome 81
109	NC_016322	TCT	4	39972	39983	12	Silene conica mitochondrion chromosome 126
110	NC_016324	TCT	4	45964	45975	12	Silene conica mitochondrion chromosome 118
111	NC_016327	TCT	4	12498	12509	12	Silene conica mitochondrion chromosome 96
112	NC_016339	TCT	4	47544	47555	12	Silene conica mitochondrion chromosome 49
113	NC_016343	TCT	4	68443	68454	12	Silene conica mitochondrion chromosome 75
114	NC_016344	TCT	4	27685	27696	12	Silene noctiflora mitochondrion chromosome 35
115	NC_016345	TCT	4	22653	22664	12	Silene noctiflora mitochondrion chromosome 12
116	NC_016345	TCT	4	57863	57874	12	Silene noctiflora mitochondrion chromosome 12
117	NC_016347	TCT	4	39445	39456	12	Silene noctiflora mitochondrion chromosome 36
118	NC_016351	TCT	4	6535	6546	12	Silene noctiflora mitochondrion chromosome 43
119	NC_016352	TCT	4	8160	8171	12	Silene noctiflora mitochondrion chromosome 22
120	NC_016353	TCT	4	23326	23337	12	Silene noctiflora mitochondrion chromosome 46
121	NC_016355	TCT	4	98958	98969	12	Silene noctiflora mitochondrion chromosome 6
122	NC_016358	TCT	4	11551	11562	12	Silene noctiflora mitochondrion chromosome 47
123	NC_016360	TCT	4	54040	54051	12	Silene noctiflora mitochondrion chromosome 24
124	NC_016360	TCT	4	97930	97941	12	Silene noctiflora mitochondrion chromosome 24
125	NC_016362	TCT	4	69581	69592	12	Silene noctiflora mitochondrion chromosome 29
126	NC_016367	TCT	4	39694	39705	12	Silene noctiflora mitochondrion chromosome 52
127	NC_016376	TCT	4	40847	40858	12	Silene noctiflora mitochondrion chromosome 42
128	NC_016377	TCT	4	3316	3327	12	Silene noctiflora mitochondrion chromosome 11
129	NC_016390	TCT	4	31751	31762	12	Silene noctiflora mitochondrion chromosome 8
130	NC_016397	TCT	4	39095	39106	12	Silene noctiflora mitochondrion chromosome 4
131	NC_016398	TCT	4	62000	62011	12	Silene noctiflora mitochondrion chromosome 19
132	NC_016740	TCT	4	366964	366975	12	Phoenix dactylifera mitochondrion
133	NC_016742	TCT	4	41288	41299	12	Millettia pinnata mitochondrion
134	NC_016742	TCT	4	59940	59951	12	Millettia pinnata mitochondrion
135	NC_018041	TCT	4	314596	314607	12	Mimulus guttatus mitochondrion
136	NC_018041	TCT	4	327165	327176	12	Mimulus guttatus mitochondrion
137	NC_018340	TCT	4	9086	9097	12	Champsocephalus gunnari mitochondrion
138	NC_018351	TCT	4	1938	1949	12	Sphenophorus sp. BYU-CO246 mitochondrion
139	NC_018537	TCT	4	9731	9742	12	Craspedacusta sowerbyi mitochondrion
140	NC_018568	TCT	4	59805	59816	12	Trebouxiophyceae sp. MX-AZ01 mitochondrion
141	NC_018765	TCT	4	267	278	12	Xizicus fascipes mitochondrion
142	NC_020022	TCT	4	3122	3133	12	Scyllarides latus mitochondrion
143	NC_020370	TCT	4	13846	13857	12	Ministeria vibrans mitochondrion
144	NC_020432	TCT	4	8906	8917	12	Equus grevyi mitochondrion
145	NC_020433	TCT	4	8909	8920	12	Equus kiang mitochondrion
146	NC_020476	TCT	4	8907	8918	12	Equus zebra isolate H11 mitochondrion
147	NC_021092	TCT	4	83113	83124	12	Vigna angularis mitochondrial DNA
148	NC_021133	TCT	4	9090	9101	12	Epinephelus stictus mitochondrion
149	NC_021386	TCT	4	8883	8894	12	Chinchilla lanigera mitochondrion
150	NC_021399	TCT	4	1271	1282	12	Butomus umbellatus mitochondrion
151	NC_021399	TCT	4	255184	255195	12	Butomus umbellatus mitochondrion
152	NC_021415	TCT	4	4871	4882	12	Thyridosmylus langii mitochondrion
153	NC_021450	TCT	4	9093	9104	12	Epinephelus quoyanus mitochondrion
154	NC_021763	TCT	4	11672	11683	12	Micropercops swinhonis mitochondrion
155	NC_001640	TCT	4	8916	8927	12	Equus caballus mitochondrion
156	NC_001788	TCT	4	8912	8923	12	Equus asinus mitochondrion
157	NC_002734	TCT	4	9087	9098	12	Plecoglossus altivelis mitochondrion
158	NC_003344	TCT	4	14072	14083	12	Thyropygus sp. DVL-2001 mitochondrion
159	NC_004027	TCT	4	5634	5645	12	Manis tetradactyla mitochondrion
160	NC_004405	TCT	4	10872	10883	12	Carangoides armatus mitochondrion
161	NC_005145	TCT	4	5832	5843	12	Hiodon alosoides mitochondrion
162	NC_006916	TCT	4	14574	14585	12	Harpiosquilla harpax mitochondrion
163	NC_007234	TCT	4	9534	9545	12	Placopecten magellanicus mitochondrion
164	NC_007444	TCT	4	14685	14696	12	Squilla empusa mitochondrion
165	NC_007631	TCT	4	13558	13569	12	Sminthopsis crassicaudata mitochondrion
166	NC_007689	TCT	4	7744	7755	12	Neogymnocrinus richeri mitochondrion
167	NC_007894	TCT	4	893	904	12	Sepioteuthis lessoniana mitochondrion
168	NC_008693	TCT	4	12566	12577	12	Romanomermis iyengari mitochondrion
169	NC_009057	TCT	4	5799	5810	12	Oreochromis sp. KM-2006 mitochondrion
170	NC_009854	TCT	4	9070	9081	12	Spicara maena mitochondrion
171	NC_009868	TCT	4	5787	5798	12	Coreoperca kawamebari mitochondrion
172	NC_010689	TCT	4	9039	9050	12	Chionodraco myersi mitochondrion
173	NC_010960	TCT	4	5782	5793	12	Sphoeroides pachygaster mitochondrion
174	NC_010972	TCT	4	5584	5595	12	Anolis carolinensis mitochondrion
175	NC_011007	TCT	4	9050	9061	12	Maulisia mauli mitochondrion
176	NC_011009	TCT	4	9731	9742	12	Normichthys operosus mitochondrion
177	NC_011010	TCT	4	9042	9053	12	Sagamichthys abei mitochondrion
178	NC_011128	TCT	4	2074	2085	12	Ochrogaster lunifer mitochondrion
179	NC_011172	TCT	4	5783	5794	12	Xenopoecilus sarasinorum mitochondrion
180	NC_011174	TCT	4	9066	9077	12	Menidia menidia mitochondrion
181	NC_011582	TCT	4	10817	10828	12	Spinachia spinachia mitochondrion
182	NC_012574	TCT	4	1731	1742	12	Tachypleus tridentatus mitochondrion
183	NC_012709	TCT	4	9083	9094	12	Anyperodon leucogrammicus mitochondrion
184	NC_013089	TCT	4	5786	5797	12	Xiphophorus hellerii mitochondrion
185	NC_013149	TCT	4	9086	9097	12	Hyperoglyphe japonica mitochondrion
186	NC_013249	TCT	4	2043	2054	12	Macrogyrus oblongus mitochondrion
187	NC_013480	TCT	4	14471	14482	12	Xenograpsus testudinatus mitochondrion
188	NC_013581	TCT	4	10838	10849	12	Conocara macropterum mitochondrion
189	NC_013877	TCT	4	4546	4557	12	Balanoglossus clavigerus mitochondrion

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Mitochondria Motifs - Perfect TCT Repeats