ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

Mitochondria Motifs - Perfect GAAA Repeats

S.No	Sequence ID	Motif	Iterations	Start	End	Tract Length	Sequence Name
1	NC_014050	GAAA	5	287569	287588	20	Cucurbita pepo mitochondrion
2	NC_014050	GAAA	5	807123	807142	20	Cucurbita pepo mitochondrion
3	NC_012651	GAAA	4	180110	180125	16	Megaceros aenigmaticus mitochondrion
4	NC_014050	GAAA	4	272238	272253	16	Cucurbita pepo mitochondrion
5	NC_014050	GAAA	4	674698	674713	16	Cucurbita pepo mitochondrion
6	NC_014050	GAAA	4	815938	815953	16	Cucurbita pepo mitochondrion
7	NC_014865	GAAA	4	8746	8761	16	Paranemertes cf. peregrina SCS-2010 mitochondrion
8	NC_015121	GAAA	4	165987	166002	16	Vigna radiata mitochondrion
9	NC_016300	GAAA	4	33483	33498	16	Silene conica mitochondrion chromosome 62
10	NC_001284	GAAA	3	96915	96926	12	Arabidopsis thaliana mitochondrion
11	NC_001284	GAAA	3	247269	247280	12	Arabidopsis thaliana mitochondrion
12	NC_001284	GAAA	3	299392	299403	12	Arabidopsis thaliana mitochondrion
13	NC_001284	GAAA	3	348966	348977	12	Arabidopsis thaliana mitochondrion
14	NC_001660	GAAA	3	111998	112009	12	Marchantia polymorpha mitochondrion
15	NC_003055	GAAA	3	11700	11711	12	Pylaiella littoralis mitochondrion
16	NC_006581	GAAA	3	181916	181927	12	Nicotiana tabacum mitochondrion
17	NC_006581	GAAA	3	294665	294676	12	Nicotiana tabacum mitochondrion
18	NC_006581	GAAA	3	386427	386438	12	Nicotiana tabacum mitochondrion
19	NC_007886	GAAA	3	24054	24065	12	Oryza sativa Indica Group mitochondrion
20	NC_007886	GAAA	3	119114	119125	12	Oryza sativa Indica Group mitochondrion
21	NC_007886	GAAA	3	195473	195484	12	Oryza sativa Indica Group mitochondrion
22	NC_007982	GAAA	3	207749	207760	12	Zea mays subsp. mays mitochondrion
23	NC_007982	GAAA	3	279197	279208	12	Zea mays subsp. mays mitochondrion
24	NC_008285	GAAA	3	46181	46192	12	Brassica napus mitochondrion
25	NC_008331	GAAA	3	119432	119443	12	Zea perennis mitochondrion
26	NC_008331	GAAA	3	264404	264415	12	Zea perennis mitochondrion
27	NC_008332	GAAA	3	53112	53123	12	Zea mays subsp. parviglumis mitochondrion
28	NC_008332	GAAA	3	124596	124607	12	Zea mays subsp. parviglumis mitochondrion
29	NC_008332	GAAA	3	559987	559998	12	Zea mays subsp. parviglumis mitochondrion
30	NC_008360	GAAA	3	294516	294527	12	Sorghum bicolor mitochondrion
31	NC_008362	GAAA	3	566910	566921	12	Tripsacum dactyloides mitochondrion
32	NC_011033	GAAA	3	23559	23570	12	Oryza sativa Japonica Group mitochondrion
33	NC_011033	GAAA	3	118086	118097	12	Oryza sativa Japonica Group mitochondrion
34	NC_011033	GAAA	3	194405	194416	12	Oryza sativa Japonica Group mitochondrion
35	NC_012119	GAAA	3	99712	99723	12	Vitis vinifera mitochondrion
36	NC_012119	GAAA	3	171237	171248	12	Vitis vinifera mitochondrion
37	NC_012119	GAAA	3	703993	704004	12	Vitis vinifera mitochondrion
38	NC_013816	GAAA	3	148806	148817	12	Oryza rufipogon mitochondrion
39	NC_013816	GAAA	3	266451	266462	12	Oryza rufipogon mitochondrion
40	NC_013816	GAAA	3	519088	519099	12	Oryza rufipogon mitochondrion
41	NC_014043	GAAA	3	49217	49228	12	Citrullus lanatus mitochondrion
42	NC_014050	GAAA	3	102819	102830	12	Cucurbita pepo mitochondrion
43	NC_014050	GAAA	3	128164	128175	12	Cucurbita pepo mitochondrion
44	NC_014050	GAAA	3	200083	200094	12	Cucurbita pepo mitochondrion
45	NC_014050	GAAA	3	208162	208173	12	Cucurbita pepo mitochondrion
46	NC_014050	GAAA	3	230852	230863	12	Cucurbita pepo mitochondrion
47	NC_014050	GAAA	3	388356	388367	12	Cucurbita pepo mitochondrion
48	NC_014050	GAAA	3	408713	408724	12	Cucurbita pepo mitochondrion
49	NC_014050	GAAA	3	511664	511675	12	Cucurbita pepo mitochondrion
50	NC_014050	GAAA	3	531327	531338	12	Cucurbita pepo mitochondrion
51	NC_014050	GAAA	3	564332	564343	12	Cucurbita pepo mitochondrion
52	NC_014050	GAAA	3	605657	605668	12	Cucurbita pepo mitochondrion
53	NC_014050	GAAA	3	655061	655072	12	Cucurbita pepo mitochondrion
54	NC_014050	GAAA	3	674682	674693	12	Cucurbita pepo mitochondrion
55	NC_014050	GAAA	3	705109	705120	12	Cucurbita pepo mitochondrion
56	NC_014050	GAAA	3	706751	706762	12	Cucurbita pepo mitochondrion
57	NC_014050	GAAA	3	718597	718608	12	Cucurbita pepo mitochondrion
58	NC_014050	GAAA	3	731625	731636	12	Cucurbita pepo mitochondrion
59	NC_014050	GAAA	3	834476	834487	12	Cucurbita pepo mitochondrion
60	NC_014050	GAAA	3	878666	878677	12	Cucurbita pepo mitochondrion
61	NC_014050	GAAA	3	981638	981649	12	Cucurbita pepo mitochondrion
62	NC_015141	GAAA	3	393980	393991	12	Ricinus communis mitochondrion
63	NC_016004	GAAA	3	25970	25981	12	Cucumis sativus mitochondrion chromosome 2
64	NC_016005	GAAA	3	193509	193520	12	Cucumis sativus mitochondrion chromosome 1
65	NC_016005	GAAA	3	224498	224509	12	Cucumis sativus mitochondrion chromosome 1
66	NC_016005	GAAA	3	330844	330855	12	Cucumis sativus mitochondrion chromosome 1
67	NC_016005	GAAA	3	451404	451415	12	Cucumis sativus mitochondrion chromosome 1
68	NC_016005	GAAA	3	763105	763116	12	Cucumis sativus mitochondrion chromosome 1
69	NC_016005	GAAA	3	978686	978697	12	Cucumis sativus mitochondrion chromosome 1
70	NC_016005	GAAA	3	1247151	1247162	12	Cucumis sativus mitochondrion chromosome 1
71	NC_016005	GAAA	3	1362447	1362458	12	Cucumis sativus mitochondrion chromosome 1
72	NC_016005	GAAA	3	1377431	1377442	12	Cucumis sativus mitochondrion chromosome 1
73	NC_016206	GAAA	3	10418	10429	12	Silene conica mitochondrion chromosome 93
74	NC_016209	GAAA	3	13120	13131	12	Silene conica mitochondrion chromosome 31
75	NC_016212	GAAA	3	38324	38335	12	Silene conica mitochondrion chromosome 5
76	NC_016213	GAAA	3	17232	17243	12	Silene conica mitochondrion chromosome 111
77	NC_016214	GAAA	3	57536	57547	12	Silene conica mitochondrion chromosome 102
78	NC_016219	GAAA	3	95763	95774	12	Silene conica mitochondrion chromosome 27
79	NC_016230	GAAA	3	105867	105878	12	Silene conica mitochondrion chromosome 2
80	NC_016230	GAAA	3	148672	148683	12	Silene conica mitochondrion chromosome 2
81	NC_016232	GAAA	3	69002	69013	12	Silene conica mitochondrion chromosome 13
82	NC_016235	GAAA	3	66871	66882	12	Silene conica mitochondrion chromosome 7
83	NC_016236	GAAA	3	20277	20288	12	Silene conica mitochondrion chromosome 55
84	NC_016236	GAAA	3	41915	41926	12	Silene conica mitochondrion chromosome 55
85	NC_016237	GAAA	3	19790	19801	12	Silene conica mitochondrion chromosome 44
86	NC_016244	GAAA	3	63176	63187	12	Silene conica mitochondrion chromosome 39
87	NC_016246	GAAA	3	47305	47316	12	Silene conica mitochondrion chromosome 26
88	NC_016248	GAAA	3	41882	41893	12	Silene conica mitochondrion chromosome 38
89	NC_016248	GAAA	3	77409	77420	12	Silene conica mitochondrion chromosome 38
90	NC_016249	GAAA	3	72102	72113	12	Silene conica mitochondrion chromosome 1
91	NC_016250	GAAA	3	83395	83406	12	Silene conica mitochondrion chromosome 34
92	NC_016253	GAAA	3	70457	70468	12	Silene conica mitochondrion chromosome 50
93	NC_016259	GAAA	3	58183	58194	12	Silene conica mitochondrion chromosome 63
94	NC_016261	GAAA	3	38233	38244	12	Silene conica mitochondrion chromosome 41
95	NC_016261	GAAA	3	80804	80815	12	Silene conica mitochondrion chromosome 41
96	NC_016266	GAAA	3	14624	14635	12	Silene conica mitochondrion chromosome 80
97	NC_016270	GAAA	3	73586	73597	12	Silene conica mitochondrion chromosome 21
98	NC_016273	GAAA	3	50989	51000	12	Silene conica mitochondrion chromosome 15
99	NC_016276	GAAA	3	63493	63504	12	Silene conica mitochondrion chromosome 74
100	NC_016282	GAAA	3	48295	48306	12	Silene conica mitochondrion chromosome 88
101	NC_016291	GAAA	3	68000	68011	12	Silene conica mitochondrion chromosome 71
102	NC_016293	GAAA	3	55089	55100	12	Silene conica mitochondrion chromosome 19
103	NC_016306	GAAA	3	20020	20031	12	Silene conica mitochondrion chromosome 72
104	NC_016317	GAAA	3	36140	36151	12	Silene conica mitochondrion chromosome 91
105	NC_016324	GAAA	3	25244	25255	12	Silene conica mitochondrion chromosome 118
106	NC_016326	GAAA	3	53136	53147	12	Silene conica mitochondrion chromosome 121
107	NC_016330	GAAA	3	31498	31509	12	Silene conica mitochondrion chromosome 116
108	NC_016331	GAAA	3	9660	9671	12	Silene conica mitochondrion
109	NC_016339	GAAA	3	21667	21678	12	Silene conica mitochondrion chromosome 49
110	NC_016341	GAAA	3	55483	55494	12	Silene conica mitochondrion chromosome 46
111	NC_016341	GAAA	3	71090	71101	12	Silene conica mitochondrion chromosome 46
112	NC_016341	GAAA	3	78985	78996	12	Silene conica mitochondrion chromosome 46
113	NC_016345	GAAA	3	128594	128605	12	Silene noctiflora mitochondrion chromosome 12
114	NC_016347	GAAA	3	42680	42691	12	Silene noctiflora mitochondrion chromosome 36
115	NC_016348	GAAA	3	56677	56688	12	Silene noctiflora mitochondrion chromosome 3
116	NC_016349	GAAA	3	25331	25342	12	Silene noctiflora mitochondrion chromosome 10
117	NC_016351	GAAA	3	63553	63564	12	Silene noctiflora mitochondrion chromosome 43
118	NC_016352	GAAA	3	87690	87701	12	Silene noctiflora mitochondrion chromosome 22
119	NC_016355	GAAA	3	3230	3241	12	Silene noctiflora mitochondrion chromosome 6
120	NC_016360	GAAA	3	7254	7265	12	Silene noctiflora mitochondrion chromosome 24
121	NC_016360	GAAA	3	37161	37172	12	Silene noctiflora mitochondrion chromosome 24
122	NC_016363	GAAA	3	35392	35403	12	Silene noctiflora mitochondrion chromosome 13
123	NC_016365	GAAA	3	87081	87092	12	Silene noctiflora mitochondrion chromosome 16
124	NC_016371	GAAA	3	87969	87980	12	Silene noctiflora mitochondrion chromosome 40
125	NC_016377	GAAA	3	66031	66042	12	Silene noctiflora mitochondrion chromosome 11
126	NC_016378	GAAA	3	23916	23927	12	Silene noctiflora mitochondrion chromosome 32
127	NC_016379	GAAA	3	32937	32948	12	Silene noctiflora mitochondrion chromosome 39
128	NC_016383	GAAA	3	27558	27569	12	Silene noctiflora mitochondrion chromosome 26
129	NC_016383	GAAA	3	34934	34945	12	Silene noctiflora mitochondrion chromosome 26
130	NC_016385	GAAA	3	81690	81701	12	Silene noctiflora mitochondrion chromosome 55
131	NC_016390	GAAA	3	26787	26798	12	Silene noctiflora mitochondrion chromosome 8
132	NC_016393	GAAA	3	129422	129433	12	Silene noctiflora mitochondrion chromosome 1
133	NC_016406	GAAA	3	112709	112720	12	Silene vulgaris mitochondrion chromosome 1
134	NC_016406	GAAA	3	367167	367178	12	Silene vulgaris mitochondrion chromosome 1
135	NC_016684	GAAA	3	9456	9467	12	Gigaspora margarita mitochondrion
136	NC_016740	GAAA	3	382085	382096	12	Phoenix dactylifera mitochondrion
137	NC_016741	GAAA	3	491845	491856	12	Boea hygrometrica mitochondrion
138	NC_016743	GAAA	3	295337	295348	12	Lotus japonicus mitochondrion
139	NC_017855	GAAA	3	240465	240476	12	Daucus carota subsp. sativus mitochondrion
140	NC_018041	GAAA	3	233108	233119	12	Mimulus guttatus mitochondrion
141	NC_018041	GAAA	3	235119	235130	12	Mimulus guttatus mitochondrion
142	NC_018041	GAAA	3	295528	295539	12	Mimulus guttatus mitochondrion
143	NC_018041	GAAA	3	387292	387303	12	Mimulus guttatus mitochondrion
144	NC_018554	GAAA	3	132521	132532	12	Malus x domestica mitochondrion
145	NC_018554	GAAA	3	299667	299678	12	Malus x domestica mitochondrion
146	NC_020353	GAAA	3	95259	95270	12	Microbotryum lychnidis-dioicae strain MvSl135HT1 mitochondrion
147	NC_020619	GAAA	3	1226	1237	12	Tragelaphus imberbis mitochondrion
148	NC_020627	GAAA	3	1223	1234	12	Damaliscus pygargus mitochondrion
149	NC_021152	GAAA	3	101756	101767	12	Liriodendron tulipifera mitochondrion
150	NC_021399	GAAA	3	51249	51260	12	Butomus umbellatus mitochondrion
151	NC_021399	GAAA	3	242386	242397	12	Butomus umbellatus mitochondrion
152	NC_022176	GAAA	3	52280	52291	12	Candida chauliodes strain NRRL Y-27909 mitochondrion
153	NC_006285	GAAA	3	1843	1854	12	Geocalamus acutus mitochondrion
154	NC_006992	GAAA	3	14396	14407	12	Eriocheir sinensis mitochondrion

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Mitochondria Motifs - Perfect GAAA Repeats