ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect ATAAGC Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_008590ATAAGC312393112394818 Hordeum vulgare subsp. vulgare chloroplast
2NC_020341ATAAGC312576212577918Arundinaria gigantea chloroplast
3NC_001320ATAAGC312230212231918 Oryza sativa Japonica Group plastid
4NC_001666ATAAGC312605912607618 Zea mays chloroplast
5NC_002762ATAAGC312232512234218 Triticum aestivum chloroplast
6NC_005878ATAAGC3472894730618 Saccharum hybrid cultivar SP-80-3280 chloroplast
7NC_005973ATAAGC312227512229218 Oryza nivara chloroplast
8NC_006084ATAAGC312684512686218 Saccharum hybrid cultivar NCo 310 chloroplast
9NC_008155ATAAGC312228112229818 Oryza sativa Indica Group chloroplast
10NC_019651ATAAGC312218112219818Lolium multiflorum plastid
11NC_008591ATAAGC312391612393318 Agrostis stolonifera chloroplast
12NC_008602ATAAGC312693612695318 Sorghum bicolor chloroplast
13NC_009950ATAAGC312226712228418 Lolium perenne chloroplast
14NC_011032ATAAGC312210712212418 Brachypodium distachyon chloroplast
15NC_011713ATAAGC312294212295918 Festuca arundinacea chloroplast
16NC_012927ATAAGC312618612620318 Bambusa oldhamii chloroplast
17NC_013088ATAAGC312626212627918 Dendrocalamus latiflorus chloroplast
18NC_013273ATAAGC312644912646618 Coix lacryma-jobi chloroplast
19NC_016677ATAAGC312427612429318Leersia tisserantii plastid
20NC_015803ATAAGC312649512651218Indocalamus longiauritus plastid
21NC_015817ATAAGC312650612652318Phyllostachys edulis chloroplast
22NC_015820ATAAGC312652612654318Acidosasa purpurea chloroplast
23NC_015826ATAAGC312666612668318Phyllostachys nigra var. henonis chloroplast
24NC_015830ATAAGC312632112633818Bambusa emeiensis chloroplast
25NC_015831ATAAGC312626312628018Ferrocalamus rimosivaginus plastid
26NC_015990ATAAGC312532712534418Panicum virgatum chloroplast
27NC_016699ATAAGC312653212654918Phyllostachys propinqua chloroplast
28NC_016718ATAAGC312403712405418Rhynchoryza subulata plastid
29NC_016927ATAAGC312233912235618Oryza meridionalis chloroplast
30NC_017835ATAAGC312232512234218Oryza rufipogon chloroplast
31NC_019648ATAAGC312228512230218Festuca altissima plastid
32NC_019649ATAAGC312036512038218Festuca ovina plastid
33NC_019650ATAAGC312229512231218Festuca pratensis plastid