ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Perfect (TTTC) Repeats

S.NoSequence IDSSRSSR TypeTract LengthStartEndSequence Name
1NC_022136(TTTC)3p4126354463555Lygodium japonicum chloroplast
2NC_022136(TTTC)3p4128955089561Lygodium japonicum chloroplast
3NC_021449(TTTC)3p4127991979930Utricularia gibba chloroplast
4NC_021441(TTTC)3p4125462154632Taiwania flousiana chloroplast
5NC_021437(TTTC)3p412113932113943Cunninghamia lanceolata chloroplast
6NC_021372(TTTC)3p4123830738318Pharus latifolius chloroplast
7NC_021110(TTTC)3p412101306101317Cephalotaxus oliveri chloroplast
8NC_021102(TTTC)3p4127334073351Pachycladon cheesemanii chloroplast
9NC_020607(TTTC)4p4168091280927Artemisia frigida chloroplast
10NC_020320(TTTC)4p4168091080925Chrysanthemum indicum voucher HeN001 chloroplast
11NC_020092(TTTC)4p4168095180966Chrysanthemum x morifolium chloroplast
12NC_020019(TTTC)3p4124528845299Camellia sinensis chloroplast
13NC_019616(TTTC)3p412153609153620Vaccinium macrocarpon plastid
14NC_018565(TTTC)3p4127372573736Pachycladon enysii chloroplast
15NC_017894(TTTC)3p412123125123136Gossypium gossypioides chloroplast
16NC_017006(TTTC)3p4122263322644Mankyua chejuensis chloroplast
17NC_016736(TTTC)3p4128043680447Ricinus communis chloroplast
18NC_016730(TTTC)3p4127367873689Silene latifolia chloroplast
19NC_016729(TTTC)3p4127038170392Silene conica chloroplast
20NC_016728(TTTC)3p4122709127102Silene noctiflora chloroplast
21NC_016728(TTTC)3p4127038670397Silene noctiflora chloroplast
22NC_016727(TTTC)3p4127322473235Silene vulgaris chloroplast
23NC_016065(TTTC)3p4125460154612Taiwania cryptomerioides chloroplast DNA
24NC_016063(TTTC)3p412102371102382Cephalotaxus wilsoniana chloroplast DNA
25NC_015983(TTTC)3p4123279132802Cucumis melo subsp. melo chloroplast
26NC_015899(TTTC)3p4124707247083Wolffia australiana chloroplast
27NC_015891(TTTC)3p4124802948040Spirodela polyrhiza chloroplast
28NC_015621(TTTC)3p4128263882649Ageratina adenophora chloroplast
29NC_015543(TTTC)3p4128100981020Jacobaea vulgaris chloroplast
30NC_015308(TTTC)3p4122673126742Hevea brasiliensis chloroplast
31NC_015308(TTTC)3p4128734487355Hevea brasiliensis chloroplast
32NC_014874(TTTC)3p4123015030161Rhizanthella gardneri plastid
33NC_014697(TTTC)3p4124473944750Prunus persica chloroplast
34NC_014570(TTTC)4p4167945579470Eucalyptus grandis chloroplast
35NC_014570(TTTC)3p4128698686997Eucalyptus grandis chloroplast
36NC_014346(TTTC)3p412257144257155Floydiella terrestris chloroplast
37NC_014063(TTTC)3p4122087020881 Lathyrus sativus chloroplast
38NC_014063(TTTC)3p4122087020881 Lathyrus sativus chloroplast
39NC_014056(TTTC)3p4128693386944 Oncidium Gower Ramsey chloroplast
40NC_014056(TTTC)3p4128693386944 Oncidium Gower Ramsey chloroplast
41NC_013703(TTTC)3p4123113631147 Cryptomonas paramecium plastid
42NC_013703(TTTC)3p4123113631147 Cryptomonas paramecium plastid
43NC_013553(TTTC)3p4128281882829 Parthenium argentatum chloroplast
44NC_012818(TTTC)3p412134759134770 Alsophila spinulosa chloroplast
45NC_012615(TTTC)3p4128649386504 Megaleranthis saniculifolia chloroplast
46NC_012224(TTTC)3p4128129581306 Jatropha curcas chloroplast
47NC_010654(TTTC)3p4124878448795 Welwitschia mirabilis chloroplast
48NC_010601(TTTC)3p4128175681767 Guizotia abyssinica chloroplast
49NC_010548(TTTC)3p4129632296333 Cryptomeria japonica chloroplast
50NC_010433(TTTC)3p4128748187492 Manihot esculenta chloroplast
51NC_010362(TTTC)3p412130446130457 Oenothera parviflora chloroplast
52NC_010361(TTTC)3p412131704131715 Oenothera biennis chloroplast
53NC_010360(TTTC)3p412132189132200 Oenothera glazioviana chloroplast
54NC_010358(TTTC)3p412131645131656 Oenothera argillicola chloroplast
55NC_010323(TTTC)3p4127935679367 Carica papaya chloroplast
56NC_010109(TTTC)3p4124657246583 Lemna minor chloroplast
57NC_009808(TTTC)3p4127141571426 Ipomoea purpurea chloroplast
58NC_009598(TTTC)3p4125019650207 Chloranthus spicatus chloroplast
59NC_009273(TTTC)3p4127388773898 Lepidium virginicum chloroplast
60NC_009271(TTTC)4p4168225982274 Crucihimalaya wallichii chloroplast
61NC_009268(TTTC)3p4123446734478 Arabis hirsuta chloroplast
62NC_009267(TTTC)3p4127370173712 Olimarabidopsis pumila chloroplast
63NC_009143(TTTC)3p4127580975820 Populus trichocarpa chloroplast
64NC_008796(TTTC)3p4128260182612 Ranunculus macranthus chloroplast
65NC_008456(TTTC)3p4128216282173 Drimys granadensis chloroplast
66NC_008407(TTTC)3p4129088990900 Jasminum nudiflorum chloroplast
67NC_008372(TTTC)3p412194244194255 Stigeoclonium helveticum chloroplast
68NC_008334(TTTC)3p4121488614897 Citrus sinensis chloroplast
69NC_008235(TTTC)3p4127533975350 Populus alba chloroplast
70NC_008115(TTTC)3p4128712087131 Eucalyptus globulus subsp. globulus chloroplast
71NC_008101(TTTC)3p412112413112424 Scenedesmus obliquus chloroplast
72NC_007977(TTTC)3p4128174381754 Helianthus annuus chloroplast
73NC_007578(TTTC)3p4128228282293 Lactuca sativa chloroplast
74NC_007500(TTTC)3p41241064117 Nicotiana sylvestris chloroplast
75NC_002693(TTTC)3p412132185132196 Oenothera elata subsp. hookeri plastid plastome I
76NC_002202(TTTC)3p4127347173482 Spinacia oleracea plastid
77NC_001879(TTTC)3p41241064117 Nicotiana tabacum plastid
78NC_001865(TTTC)3p4122855928570 Chlorella vulgaris chloroplast
79NC_001840(TTTC)3p4122364423655 Cyanidium caldarium chloroplast