ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Perfect (TTCT) Repeats

S.NoSequence IDSSRSSR TypeTract LengthStartEndSequence Name
1NC_022135(TTCT)3p4126334163352Aegilops speltoides isolate SPE0661 chloroplast
2NC_022133(TTCT)3p4126365263663Aegilops tauschii chloroplast
3NC_021762(TTCT)3p4126450864519Triticum urartu chloroplast
4NC_021761(TTCT)3p4126458764598Secale cereale chloroplast
5NC_021760(TTCT)3p4126482964840Triticum monococcum chloroplast
6NC_021433(TTCT)3p4121400314014Cymbidium mannii voucher KUN:YJB100602 chloroplast
7NC_021432(TTCT)3p4121388513896Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
8NC_021431(TTCT)3p4121412514136Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
9NC_021430(TTCT)3p4121405114062Cymbidium sinense voucher KUN:YJB100605 chloroplast
10NC_021429(TTCT)3p4121407714088Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
11NC_021372(TTCT)3p4128157281583Pharus latifolius chloroplast
12NC_021121(TTCT)4p4166507065085Ardisia polysticta chloroplast
13NC_020371(TTCT)3p4123388033891Pavlova lutheri chloroplast
14NC_020363(TTCT)3p4124473444745Zingiber spectabile plastid
15NC_020321(TTCT)3p412122919122930Taxus mairei voucher NN014 chloroplast
16NC_019616(TTCT)3p4122697726988Vaccinium macrocarpon plastid
17NC_019616(TTCT)3p4126119361204Vaccinium macrocarpon plastid
18NC_018523(TTCT)3p4127890078911Saccharina japonica chloroplast
19NC_018117(TTCT)3p4128450784518Datura stramonium chloroplast
20NC_016753(TTCT)3p4124985649867Colocasia esculenta chloroplast
21NC_016734(TTCT)3p412119419119430Brassica napus chloroplast
22NC_016708(TTCT)3p4126407964090Millettia pinnata chloroplast
23NC_016468(TTCT)4p416125466125481Boea hygrometrica chloroplast
24NC_015830(TTCT)3p4128127381284Bambusa emeiensis chloroplast
25NC_015139(TTCT)3p4123436934380Brassica rapa subsp. pekinensis chloroplast
26NC_014346(TTCT)3p412253147253158Floydiella terrestris chloroplast
27NC_014062(TTCT)3p4128054280553 Anomochloa marantoidea chloroplast
28NC_014062(TTCT)3p4121501915030 Anomochloa marantoidea chloroplast
29NC_014062(TTCT)3p4121501915030 Anomochloa marantoidea chloroplast
30NC_014062(TTCT)3p4128054280553 Anomochloa marantoidea chloroplast
31NC_013823(TTCT)3p4128760287613 Typha latifolia chloroplast
32NC_013823(TTCT)3p4128760287613 Typha latifolia chloroplast
33NC_012927(TTCT)3p4128117181182 Bambusa oldhamii chloroplast
34NC_011087(TTCT)3p412765778765789Paulinella chromatophora chromatophore
35NC_010601(TTCT)3p4126270362714 Guizotia abyssinica chloroplast
36NC_010442(TTCT)3p41285758586 Trachelium caeruleum chloroplast
37NC_010362(TTCT)3p4128584585856 Oenothera parviflora chloroplast
38NC_010361(TTCT)3p4128708187092 Oenothera biennis chloroplast
39NC_010360(TTCT)3p4128770887719 Oenothera glazioviana chloroplast
40NC_010358(TTCT)3p4128662786638 Oenothera argillicola chloroplast
41NC_009618(TTCT)3p4127087370884 Cycas taitungensis chloroplast
42NC_009600(TTCT)3p4128627986290 Illicium oligandrum chloroplast
43NC_008829(TTCT)3p412124504124515 Angiopteris evecta chloroplast
44NC_008796(TTCT)3p412127724127735 Ranunculus macranthus chloroplast
45NC_008372(TTCT)3p412152346152357 Stigeoclonium helveticum chloroplast
46NC_008335(TTCT)3p4124764547656 Platanus occidentalis chloroplast
47NC_008117(TTCT)8p4326872468755 Zygnema circumcarinatum chloroplast
48NC_007758(TTCT)3p4123847738488 Theileria parva strain Muguga apicoplast
49NC_007758(TTCT)3p4123804438055 Theileria parva strain Muguga apicoplast
50NC_007758(TTCT)3p4123718337194 Theileria parva strain Muguga apicoplast
51NC_007758(TTCT)3p4123675336764 Theileria parva strain Muguga apicoplast
52NC_004993(TTCT)3p412126886126897 Calycanthus floridus var. glaucus chloroplast
53NC_004766(TTCT)3p4128158781598 Adiantum capillus-veneris chloroplast
54NC_004561(TTCT)3p41254565467 Atropa belladonna chloroplast
55NC_003386(TTCT)3p412138423138434 Psilotum nudum chloroplast
56NC_003386(TTCT)3p412120302120313 Psilotum nudum chloroplast
57NC_002762(TTCT)3p4126422764238 Triticum aestivum chloroplast
58NC_002693(TTCT)3p4128745987470 Oenothera elata subsp. hookeri plastid plastome I