ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Perfect (TAAA) Repeats

S.NoSequence IDSSRSSR TypeTract LengthStartEndSequence Name
1NC_021650(TAAA)3p4122436224373Glycine syndetika voucher CSIRO:G1300 chloroplast
2NC_021649(TAAA)3p4122436224373Glycine falcata voucher CSIRO:G1718 chloroplast
3NC_021648(TAAA)3p4122436524376Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
4NC_021647(TAAA)3p4122436424375Glycine canescens voucher CSIRO:G1232 chloroplast
5NC_021646(TAAA)3p4122431524326Glycine stenophita voucher CSIRO:G1974 chloroplast
6NC_021637(TAAA)3p4122126721278Phaeocystis globosa strain Pg-G(A) chloroplast
7NC_021636(TAAA)3p4122435324364Glycine tomentella voucher CSIRO:G1403 chloroplast
8NC_021189(TAAA)3p41265246535Pyropia haitanensis voucher PH-38 chloroplast
9NC_021189(TAAA)3p412116089116100Pyropia haitanensis voucher PH-38 chloroplast
10NC_020438(TAAA)3p412149830149841Gonium pectorale chloroplast
11NC_020438(TAAA)3p412212687212698Gonium pectorale chloroplast
12NC_020431(TAAA)3p4124780247813Salvia miltiorrhiza chloroplast
13NC_020318(TAAA)3p4124662746638Magnolia grandiflora voucher NJ016 chloroplast
14NC_020317(TAAA)3p4124698546996Magnolia officinalis subsp. biloba voucher SC001 chloroplast
15NC_020316(TAAA)3p4124698947000Magnolia officinalis chloroplast
16NC_020152(TAAA)4p416237252Quercus rubra plastid
17NC_020018(TAAA)3p4124825948270Monomorphina aenigmatica strain UTEX1284 chloroplast
18NC_020018(TAAA)4p4165383853853Monomorphina aenigmatica strain UTEX1284 chloroplast
19NC_018565(TAAA)3p4124628546296Pachycladon enysii chloroplast
20NC_018051(TAAA)3p4122861328624Vigna unguiculata chloroplast
21NC_017835(TAAA)4p41641534168Oryza rufipogon chloroplast
22NC_016927(TAAA)4p41641534168Oryza meridionalis chloroplast
23NC_016735(TAAA)3p4125042550436Fucus vesiculosus chloroplast
24NC_016735(TAAA)3p412112436112447Fucus vesiculosus chloroplast
25NC_016734(TAAA)3p4124552545536Brassica napus chloroplast
26NC_016733(TAAA)3p4122254822559Pedinomonas minor chloroplast
27NC_016727(TAAA)3p4127350573516Silene vulgaris chloroplast
28NC_016068(TAAA)3p412436447Nicotiana undulata chloroplast
29NC_015983(TAAA)3p4127109971110Cucumis melo subsp. melo chloroplast
30NC_015892(TAAA)3p4124681546826Magnolia kwangsiensis chloroplast
31NC_015623(TAAA)3p41293149325Olea europaea subsp. maroccana chloroplast
32NC_015608(TAAA)3p41293179328Olea woodiana subsp. woodiana chloroplast
33NC_015204(TAAA)3p412119081119092Gossypium thurberi chloroplast
34NC_015139(TAAA)3p4124558345594Brassica rapa subsp. pekinensis chloroplast
35NC_015113(TAAA)3p412155166Anthriscus cerefolium chloroplast
36NC_015113(TAAA)3p4126807168082Anthriscus cerefolium chloroplast
37NC_014675(TAAA)3p4122005520066Isoetes flaccida chloroplast
38NC_014674(TAAA)4p416219234Castanea mollissima chloroplast
39NC_013843(TAAA)3p4122863728648 Vigna radiata chloroplast
40NC_013843(TAAA)3p4122863728648 Vigna radiata chloroplast
41NC_013359(TAAA)3p4128857788588 Bryopsis hypnoides chloroplast
42NC_012978(TAAA)3p4121910819119 Parachlorella kessleri chloroplast
43NC_012615(TAAA)3p4127638876399 Megaleranthis saniculifolia chloroplast
44NC_012224(TAAA)3p4126943069441 Jatropha curcas chloroplast
45NC_012052(TAAA)3p4124919749208 Syntrichia ruralis chloroplast
46NC_011163(TAAA)4p4165219952214 Cicer arietinum chloroplast
47NC_011163(TAAA)4p4161308413099 Cicer arietinum chloroplast
48NC_011087(TAAA)3p412880681880692Paulinella chromatophora chromatophore
49NC_011031(TAAA)3p412138488138499 Oedogonium cardiacum chloroplast
50NC_011031(TAAA)3p412102961102972 Oedogonium cardiacum chloroplast
51NC_010548(TAAA)3p4126371463725 Cryptomeria japonica chloroplast
52NC_010433(TAAA)3p4121508015091 Manihot esculenta chloroplast
53NC_010323(TAAA)3p412115164115175 Carica papaya chloroplast
54NC_010109(TAAA)3p4122930629317 Lemna minor chloroplast
55NC_009963(TAAA)3p4125711357124 Cuscuta exaltata chloroplast
56NC_009963(TAAA)3p4124038040391 Cuscuta exaltata chloroplast
57NC_009949(TAAA)3p4124392143932 Cuscuta obtusiflora chloroplast
58NC_009808(TAAA)3p4127904379054 Ipomoea purpurea chloroplast
59NC_009766(TAAA)3p4125500855019 Cuscuta reflexa chloroplast
60NC_009766(TAAA)3p4121904419055 Cuscuta reflexa chloroplast
61NC_009681(TAAA)3p4122630926320 Leptosira terrestris chloroplast
62NC_009600(TAAA)3p412144252144263 Illicium oligandrum chloroplast
63NC_009599(TAAA)3p41246364647 Buxus microphylla chloroplast
64NC_009270(TAAA)4p4166274062755 Capsella bursa-pastoris chloroplast
65NC_009270(TAAA)3p4124571945730 Capsella bursa-pastoris chloroplast
66NC_009269(TAAA)3p4124615946170 Barbarea verna chloroplast
67NC_008829(TAAA)3p4122227122282 Angiopteris evecta chloroplast
68NC_008822(TAAA)3p412135461135472 Chlorokybus atmophyticus chloroplast
69NC_008641(TAAA)3p412119175119186 Gossypium barbadense chloroplast
70NC_008334(TAAA)3p4124579245803 Citrus sinensis chloroplast
71NC_008325(TAAA)3p412160171 Daucus carota chloroplast
72NC_008155(TAAA)4p41641524167 Oryza sativa Indica Group chloroplast
73NC_008114(TAAA)3p412167141167152 Pseudendoclonium akinetum chloroplast
74NC_007932(TAAA)3p412115073115084 Porphyra yezoensis chloroplast
75NC_007758(TAAA)3p41224362447 Theileria parva strain Muguga apicoplast
76NC_007602(TAAA)3p412396407 Nicotiana tomentosiformis chloroplast
77NC_007500(TAAA)3p412426437 Nicotiana sylvestris chloroplast
78NC_006861(TAAA)3p4127479874809 Huperzia lucidula chloroplast
79NC_006861(TAAA)3p41252045215 Huperzia lucidula chloroplast
80NC_005973(TAAA)4p41641514166 Oryza nivara chloroplast
81NC_005087(TAAA)3p4124844348454 Physcomitrella patens subsp. patens chloroplast
82NC_005087(TAAA)3p41289418952 Physcomitrella patens subsp. patens chloroplast
83NC_004115(TAAA)3p4125746657477 Chaetosphaeridium globosum chloroplast
84NC_001879(TAAA)3p412426437 Nicotiana tabacum plastid
85NC_001840(TAAA)3p4124364743658 Cyanidium caldarium chloroplast
86NC_001840(TAAA)3p4123389033901 Cyanidium caldarium chloroplast
87NC_001675(TAAA)3p4129470894719 Cyanophora paradoxa cyanelle
88NC_001675(TAAA)3p4125825658267 Cyanophora paradoxa cyanelle
89NC_001603(TAAA)3p412114705114716 Euglena gracilis chloroplast
90NC_001320(TAAA)4p41641524167 Oryza sativa Japonica Group plastid
91NC_001319(TAAA)3p4127057170582 Marchantia polymorpha chloroplast
92NC_000932(TAAA)3p4124644446455 Arabidopsis thaliana chloroplast
93NC_000925(TAAA)3p412114326114337 Porphyra purpurea chloroplast
94NC_000925(TAAA)3p4128523085241 Porphyra purpurea chloroplast