ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Perfect (GAAA) Repeats

S.NoSequence IDSSRSSR TypeTract LengthStartEndSequence Name
1NC_022136(GAAA)3p412153148153159Lygodium japonicum chloroplast
2NC_021439(GAAA)3p4124882748838Pinus massoniana chloroplast
3NC_021431(GAAA)3p412122065122076Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
4NC_021430(GAAA)3p412121977121988Cymbidium sinense voucher KUN:YJB100605 chloroplast
5NC_021121(GAAA)3p412122685122696Ardisia polysticta chloroplast
6NC_020367(GAAA)3p4126908669097Dasypogon bromeliifolius plastid
7NC_020362(GAAA)3p4126837268383Heliconia collinsiana plastid
8NC_020019(GAAA)3p412118242118253Camellia sinensis chloroplast
9NC_019616(GAAA)3p412120327120338Vaccinium macrocarpon plastid
10NC_019616(GAAA)3p412129100129111Vaccinium macrocarpon plastid
11NC_019616(GAAA)3p412131580131591Vaccinium macrocarpon plastid
12NC_018569(GAAA)3p4122591825929Trebouxiophyceae sp. MX-AZ01 chloroplast
13NC_016718(GAAA)3p4123293732948Rhynchoryza subulata plastid
14NC_016433(GAAA)3p4126190161912Sesamum indicum chloroplast
15NC_015831(GAAA)3p4127524675257Ferrocalamus rimosivaginus plastid
16NC_015830(GAAA)3p4126509165102Bambusa emeiensis chloroplast
17NC_015645(GAAA)3p4122162821639Schizomeris leibleinii chloroplast
18NC_015608(GAAA)3p4126307463085Olea woodiana subsp. woodiana chloroplast
19NC_014874(GAAA)3p4125539055401Rhizanthella gardneri plastid
20NC_014057(GAAA)3p4123120231213 Pisum sativum chloroplast
21NC_014057(GAAA)3p4123120231213 Pisum sativum chloroplast
22NC_014056(GAAA)3p412141865141876 Oncidium Gower Ramsey chloroplast
23NC_014056(GAAA)3p412141865141876 Oncidium Gower Ramsey chloroplast
24NC_013088(GAAA)3p4126509265103 Dendrocalamus latiflorus chloroplast
25NC_012927(GAAA)3p4126498564996 Bambusa oldhamii chloroplast
26NC_012224(GAAA)3p4121688516896 Jatropha curcas chloroplast
27NC_011032(GAAA)3p4126166061671 Brachypodium distachyon chloroplast
28NC_010442(GAAA)3p4122610926120 Trachelium caeruleum chloroplast
29NC_010433(GAAA)3p4121618716198 Manihot esculenta chloroplast
30NC_010359(GAAA)3p4121714817159 Aneura mirabilis chloroplast
31NC_009808(GAAA)3p4124939449405 Ipomoea purpurea chloroplast
32NC_009808(GAAA)3p4124605346064 Ipomoea purpurea chloroplast
33NC_009573(GAAA)3p412121846121857 Rhodomonas salina chloroplast
34NC_009143(GAAA)3p4121423014241 Populus trichocarpa chloroplast
35NC_008326(GAAA)3p412368379 Liriodendron tulipifera chloroplast
36NC_008235(GAAA)3p4121416014171 Populus alba chloroplast
37NC_001631(GAAA)3p4124887848889 Pinus thunbergii chloroplast
38NC_000927(GAAA)3p412153848153859 Nephroselmis olivacea chloroplast