All Repeats of Ichthyophthirius multifiliis mitochondrion
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | SSR | SSR Type | Start | End | Tract Length | Primer Design |
---|---|---|---|---|---|---|---|
1 | NC_015981 | (TAA)4 | p3 | 173 | 184 | 12 | Design Primer |
2 | NC_015981 | (TAA)4 | p3 | 398 | 409 | 12 | Design Primer |
3 | NC_015981 | (TAA)4 | p3 | 623 | 634 | 12 | Design Primer |
4 | NC_015981 | (A)10 | p1 | 830 | 839 | 10 | Design Primer |
5 | NC_015981 | (TA)7 | p2 | 1219 | 1232 | 14 | Design Primer |
6 | NC_015981 | (T)13 | p1 | 1364 | 1376 | 13 | Design Primer |
7 | NC_015981 | (AT)8(A)10 | c | 5028 | 5053 | 26 | Design Primer |
8 | NC_015981 | (A)10 | p1 | 5227 | 5236 | 10 | Design Primer |
9 | NC_015981 | (T)11a(T)10 | c | 5713 | 5734 | 22 | Design Primer |
10 | NC_015981 | (T)10 | p1 | 6050 | 6059 | 10 | Design Primer |
11 | NC_015981 | (ATTT)3(T)11*actttaaaaaaaaatcttttaaatttctttttaatactaatta(T)10aaaaaaattatttagtttattttttcttttt(A)10 | c* | 6370 | 6483 | 114 | Design Primer |
12 | NC_015981 | (T)12 | p1 | 6669 | 6680 | 12 | Design Primer |
13 | NC_015981 | (T)13 | p1 | 6832 | 6844 | 13 | Design Primer |
14 | NC_015981 | (A)10 | p1 | 8896 | 8905 | 10 | Design Primer |
15 | NC_015981 | (AT)7aatctaatataaaataattaaaattattaaatagtaaattatcatagtgtaaaaataaataattatcaatttcactat(A)12 | c | 9037 | 9140 | 104 | Design Primer |
16 | NC_015981 | (CAC)4 | p3 | 10129 | 10140 | 12 | Design Primer |
17 | NC_015981 | (T)15acacggaatcaatataaagatattaactaaatatacatttgacttgatataatactat(TA)7 | c | 10352 | 10438 | 87 | Design Primer |
18 | NC_015981 | (ATAA)3 | p4 | 10838 | 10849 | 12 | Design Primer |
19 | NC_015981 | (ATT)4 | p3 | 11700 | 11711 | 12 | Design Primer |
20 | NC_015981 | (AAT)5 | p3 | 11849 | 11863 | 15 | Design Primer |
21 | NC_015981 | (AT)8a(AAAAT)3 | c | 12261 | 12292 | 32 | Design Primer |
22 | NC_015981 | (TA)8 | p2 | 12609 | 12624 | 16 | Design Primer |
23 | NC_015981 | (A)10 | p1 | 13061 | 13070 | 10 | Design Primer |
24 | NC_015981 | (T)15 | p1 | 13511 | 13525 | 15 | Design Primer |
25 | NC_015981 | (ATT)4 | p3 | 13658 | 13669 | 12 | Design Primer |
26 | NC_015981 | (A)11 | p1 | 13992 | 14002 | 11 | Design Primer |
27 | NC_015981 | (AAAT)3ataaatataatattattttaattataaaatttatataattataaaaaaaaacatctttatagaataaatataatattaagtagataaaaaataatttt(A)13tatcctttatag(TA)8 | c | 14565 | 14715 | 151 | Design Primer |
28 | NC_015981 | (A)14 | p1 | 16070 | 16083 | 14 | Design Primer |
29 | NC_015981 | (T)10aacttttagattatctcatgaattttttttatttaaattaattataattaattt(A)11 | c | 16816 | 16890 | 75 | Design Primer |
30 | NC_015981 | (TA)7 | p2 | 17107 | 17120 | 14 | Design Primer |
31 | NC_015981 | (A)12tattaatatgatataatttgataattttataacataaaatattaaaatattaaagttttcacttattaaaaaaatattattaa(ATATT)3 | c | 18208 | 18317 | 110 | Design Primer |
32 | NC_015981 | (AT)6aattataataaaatacattatcataaaaatacatttatcagtaaatacacctaaactaataattattttaaaaatatttata(AAT)4 | c | 18673 | 18778 | 106 | Design Primer |
33 | NC_015981 | (AT)6 | p2 | 19078 | 19089 | 12 | Design Primer |
34 | NC_015981 | (ATATT)3 | p5 | 19233 | 19247 | 15 | Design Primer |
35 | NC_015981 | (T)10 | p1 | 20386 | 20395 | 10 | Design Primer |
36 | NC_015981 | (TAA)4 | p3 | 21142 | 21153 | 12 | Design Primer |
37 | NC_015981 | (ATT)4 | p3 | 21559 | 21570 | 12 | Design Primer |
38 | NC_015981 | (T)11 | p1 | 22405 | 22415 | 11 | Design Primer |
39 | NC_015981 | (A)12 | p1 | 22683 | 22694 | 12 | Design Primer |
40 | NC_015981 | (TAA)4 | p3 | 23414 | 23425 | 12 | Design Primer |
41 | NC_015981 | (ATATT)3 | p5 | 23527 | 23541 | 15 | Design Primer |
42 | NC_015981 | (A)14 | p1 | 24007 | 24020 | 14 | Design Primer |
43 | NC_015981 | (TTA)4 | p3 | 24664 | 24675 | 12 | Design Primer |
44 | NC_015981 | (T)11 | p1 | 25059 | 25069 | 11 | Design Primer |
45 | NC_015981 | (TA)7ttgtaaga(T)12aaaatttaattcttctttaatattatatttttttcatttttttatattattattaattaattcagacaaatctattttatacaataa(ATT)4 | c | 25795 | 25927 | 133 | Design Primer |
46 | NC_015981 | (TA)9tttatttaatatataattataattaatcaataagtaattttttatattaaatataaaatttaataaaaatattaa(ATT)5ta(AAT)5ttaataaatatttaataaatagtataagattatataatcttatactatttattaaatattt(ATATA)3(AT)9* | c* | 26042 | 26255 | 214 | Design Primer |
47 | NC_015981 | (AT)6 | p2 | 26389 | 26400 | 12 | Design Primer |
48 | NC_015981 | (AT)10(TA)6 | c | 26735 | 26766 | 32 | Design Primer |
49 | NC_015981 | (T)10ataatttat(TA)6(T)10 | c | 27099 | 27139 | 41 | Design Primer |
50 | NC_015981 | (TA)6acgatttacaaatataatataaaatattatttaaagatttaaaaaaatcttttaaat(TAA)4ttaatatataatttctaatataatttaaaataaataaaaaaataaaaaaaaatattaaataattt(A)12tttaataataaaaaaaaatttaacaatat(A)10taatattttataat(ATAA)3atttaaacaatttaaatttttataaattaatattaatatatcaattatttt(TAATA)3 | c | 27399 | 27687 | 289 | Design Primer |
51 | NC_015981 | (A)10 | p1 | 27850 | 27859 | 10 | Design Primer |
52 | NC_015981 | (ATTT)3aaaatttttaatataaataaaatattttataataaaaattt(ATTA)3 | c | 29843 | 29907 | 65 | Design Primer |
53 | NC_015981 | (T)11 | p1 | 30018 | 30028 | 11 | Design Primer |
54 | NC_015981 | (T)13 | p1 | 30177 | 30189 | 13 | Design Primer |
55 | NC_015981 | (TAT)4 | p3 | 31590 | 31601 | 12 | Design Primer |
56 | NC_015981 | (ATT)4 | p3 | 31846 | 31857 | 12 | Design Primer |
57 | NC_015981 | (A)10 | p1 | 32993 | 33002 | 10 | Design Primer |
58 | NC_015981 | (A)12 | p1 | 33471 | 33482 | 12 | Design Primer |
59 | NC_015981 | (AT)6 | p2 | 33702 | 33713 | 12 | Design Primer |
60 | NC_015981 | (TA)6 | p2 | 34241 | 34252 | 12 | Design Primer |
61 | NC_015981 | (T)10 | p1 | 35474 | 35483 | 10 | Design Primer |
62 | NC_015981 | (T)10 | p1 | 36688 | 36697 | 10 | Design Primer |
63 | NC_015981 | (TA)7 | p2 | 36842 | 36855 | 14 | Design Primer |
64 | NC_015981 | (T)10 | p1 | 37152 | 37161 | 10 | Design Primer |
65 | NC_015981 | (ATTT)3 | p4 | 37265 | 37276 | 12 | Design Primer |
66 | NC_015981 | (T)13aagaggaacaaattttataattaataatatttattttattcaagttaaatcttatatttttaataaa(T)11 | c | 38955 | 39045 | 91 | Design Primer |
67 | NC_015981 | (TTTTTA)3 | p6 | 40427 | 40444 | 18 | Design Primer |
68 | NC_015981 | (T)11 | p1 | 40794 | 40804 | 11 | Design Primer |
69 | NC_015981 | (TA)6 | p2 | 41030 | 41041 | 12 | Design Primer |
70 | NC_015981 | (T)10 | p1 | 41768 | 41777 | 10 | Design Primer |
71 | NC_015981 | (TA)8ctatttaaatttttttactttactgaaactttattgttaca(ATT)4 | c | 41900 | 41968 | 69 | Design Primer |
72 | NC_015981 | (T)11 | p1 | 42138 | 42148 | 11 | Design Primer |
73 | NC_015981 | (AAATCT)3 | p6 | 42789 | 42806 | 18 | Design Primer |
74 | NC_015981 | (TA)6 | p2 | 43125 | 43136 | 12 | Design Primer |
75 | NC_015981 | (T)13 | p1 | 43795 | 43807 | 13 | Design Primer |
76 | NC_015981 | (T)12atttatattatctaa(T)13 | c | 44759 | 44798 | 40 | Design Primer |
77 | NC_015981 | (A)14 | p1 | 45038 | 45051 | 14 | Design Primer |
78 | NC_015981 | (ATA)4 | p3 | 45223 | 45234 | 12 | Design Primer |
79 | NC_015981 | (A)13 | p1 | 47715 | 47727 | 13 | Design Primer |
80 | NC_015981 | (TA)7 | p2 | 47859 | 47872 | 14 | Design Primer |
81 | NC_015981 | (T)11 | p1 | 48252 | 48262 | 11 | Design Primer |
82 | NC_015981 | (TTA)4 | p3 | 48456 | 48467 | 12 | Design Primer |
83 | NC_015981 | (TTA)4 | p3 | 48681 | 48692 | 12 | Design Primer |
84 | NC_015981 | (TTA)4 | p3 | 48906 | 48917 | 12 | Design Primer |
85 | NC_015981 | (TTA)4 | p3 | 49131 | 49142 | 12 | Design Primer |
86 | NC_015981 | (TTA)4 | p3 | 49356 | 49367 | 12 | Design Primer |
87 | NC_015981 | (TTA)4 | p3 | 49581 | 49592 | 12 | Design Primer |
88 | NC_015981 | (TTA)4 | p3 | 49806 | 49817 | 12 | Design Primer |
89 | NC_015981 | (TTA)4 | p3 | 50031 | 50042 | 12 | Design Primer |
90 | NC_015981 | (TTA)4 | p3 | 50256 | 50267 | 12 | Design Primer |
91 | NC_015981 | (TTA)4 | p3 | 50481 | 50492 | 12 | Design Primer |
92 | NC_015981 | (TTA)4 | p3 | 50706 | 50717 | 12 | Design Primer |
93 | NC_015981 | (TTA)4 | p3 | 50931 | 50942 | 12 | Design Primer |
94 | NC_015981 | (TTA)4 | p3 | 51156 | 51167 | 12 | Design Primer |
95 | NC_015981 | (TTA)4 | p3 | 51381 | 51392 | 12 | Design Primer |
96 | NC_015981 | (TTA)4 | p3 | 51606 | 51617 | 12 | Design Primer |