ChloroMitoSSRDB 2.00 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Compound Compound Repeats of Zea mays subsp. parviglumis mitochondrion

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S.No.Genome IDSSRSSR TypeStartEndTract LengthPrimer Design
1NC_008332(CTCTA)4ct(AAATG)4c4498453942Design Primer
2NC_008332(TTCTA)3tcttgataaaactatgtaaacgataagtaagcttacggcataacttcttgtattccgatagctgg(CTTA)3c660156610692Design Primer
3NC_008332(CTCTA)4ct(AAATG)4c933969343742Design Primer
4NC_008332(TATTAC)5t(ATGGAA)3c13115813120649Design Primer
5NC_008332(TGAG)3tccactgtttacgttacaactagcagtagcgtgtcaattctagtcagaaaaaaagctttccattgattcatgata(GTGCC)3c155989156090102Design Primer
6NC_008332(T)10agttcgcactgctctttctctctaaattgcatcaaagaaaat(AG)6c20441020447364Design Primer
7NC_008332(CTC)4gttgttgccgtggagaaagaccgtattcacgtctagttgaaatagatgcaagtcctcggccgc(TACTA)4c29960329969795Design Primer
8NC_008332(ATAGA)3taggtatctctgtggatagagataaagatagggatccctcgaaatatatggaaaaagtgcactttttg(ACT)4c32204532213995Design Primer
9NC_008332(ATA)5tatattatatcttta(TAT)4c33146233150342Design Primer
10NC_008332(TTAGT)4(ATAGT)5c40511440515845Design Primer
11NC_008332(CTC)4gttgttgccgtggagaaagaccgtattcacgtctagttgaaatagatgcaagtcctcggccgc(TACTA)4c44625644635095Design Primer
12NC_008332(ATAGA)3taggtatctctgtggatagagataaagatagggatccctcgaaatatatggaaaaagtgcactttttg(ACT)4c46869846879295Design Primer
13NC_008332(ATA)5tatattatatcttta(TAT)4c47811547815642Design Primer
14NC_008332(TACTA)6(AACTA)3c55833155837545Design Primer
15NC_008332(GAAA)3attcccatgtgaaatttcactttcactttaacaataacaatgcctgcttttttaatgttataaacttagaccaaaaaaataaccataccataagccgtat(AACA)3c559987560110124Design Primer
16NC_008332(TAAGTG)3aacgaaatgctga(TTGC)3c63650263654443Design Primer
17NC_008332(TACTA)3taacgcacacgtttcattattgttgctttactat(ATATG)3c65631165637464Design Primer