Hexa-nucleotide Imperfect Repeats of Huperzia squarrosa mitochondrion
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017755 | GCTGTA | 4 | 10780 | 10803 | 24 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 8 % | Non-Coding |
2 | NC_017755 | AGCAAA | 3 | 22887 | 22905 | 19 | 66.67 % | 0 % | 16.67 % | 16.67 % | 10 % | 38509973 |
3 | NC_017755 | ATATCT | 3 | 93656 | 93673 | 18 | 33.33 % | 50 % | 0 % | 16.67 % | 0 % | Non-Coding |
4 | NC_017755 | ATATCT | 3 | 94095 | 94112 | 18 | 33.33 % | 50 % | 0 % | 16.67 % | 5 % | Non-Coding |
5 | NC_017755 | ATACTA | 3 | 114985 | 115002 | 18 | 50 % | 33.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
6 | NC_017755 | TTGTTT | 3 | 171375 | 171392 | 18 | 0 % | 83.33 % | 16.67 % | 0 % | 5 % | Non-Coding |
7 | NC_017755 | TTTCTT | 4 | 209987 | 210010 | 24 | 0 % | 83.33 % | 0 % | 16.67 % | 8 % | Non-Coding |
8 | NC_017755 | AGAAAA | 3 | 225029 | 225047 | 19 | 83.33 % | 0 % | 16.67 % | 0 % | 10 % | Non-Coding |
9 | NC_017755 | TACTAT | 3 | 233508 | 233525 | 18 | 33.33 % | 50 % | 0 % | 16.67 % | 5 % | Non-Coding |
10 | NC_017755 | CACCCC | 3 | 305801 | 305818 | 18 | 16.67 % | 0 % | 0 % | 83.33 % | 5 % | Non-Coding |
11 | NC_017755 | AGATAT | 3 | 309772 | 309789 | 18 | 50 % | 33.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
12 | NC_017755 | CACCTT | 3 | 310537 | 310554 | 18 | 16.67 % | 33.33 % | 0 % | 50 % | 5 % | Non-Coding |
13 | NC_017755 | GGGGGT | 3 | 326814 | 326830 | 17 | 0 % | 16.67 % | 83.33 % | 0 % | 5 % | Non-Coding |
14 | NC_017755 | GGGAAA | 3 | 389869 | 389886 | 18 | 50 % | 0 % | 50 % | 0 % | 5 % | 38509976 |