Penta-nucleotide Imperfect Repeats of Huperzia squarrosa mitochondrion
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017755 | CTTCT | 3 | 4058 | 4071 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
2 | NC_017755 | CAGTA | 3 | 14225 | 14238 | 14 | 40 % | 20 % | 20 % | 20 % | 7 % | Non-Coding |
3 | NC_017755 | TCTTT | 3 | 19631 | 19644 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
4 | NC_017755 | TCTTT | 3 | 113654 | 113667 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
5 | NC_017755 | GAAAA | 4 | 141429 | 141448 | 20 | 80 % | 0 % | 20 % | 0 % | 5 % | Non-Coding |
6 | NC_017755 | CATAG | 3 | 147358 | 147371 | 14 | 40 % | 20 % | 20 % | 20 % | 7 % | 38509974 |
7 | NC_017755 | AAAGC | 3 | 148263 | 148276 | 14 | 60 % | 0 % | 20 % | 20 % | 7 % | 38509974 |
8 | NC_017755 | TCTCT | 3 | 149577 | 149591 | 15 | 0 % | 60 % | 0 % | 40 % | 6 % | 38509974 |
9 | NC_017755 | GAAAA | 3 | 154788 | 154802 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
10 | NC_017755 | GCGAA | 3 | 196678 | 196692 | 15 | 40 % | 0 % | 40 % | 20 % | 0 % | Non-Coding |
11 | NC_017755 | TTTTC | 3 | 211362 | 211375 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
12 | NC_017755 | TCCCC | 3 | 215451 | 215465 | 15 | 0 % | 20 % | 0 % | 80 % | 6 % | Non-Coding |
13 | NC_017755 | CTTTT | 3 | 242393 | 242406 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
14 | NC_017755 | CTTCG | 3 | 271508 | 271521 | 14 | 0 % | 40 % | 20 % | 40 % | 7 % | Non-Coding |
15 | NC_017755 | AACAT | 3 | 286371 | 286385 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
16 | NC_017755 | CAAAA | 3 | 323466 | 323480 | 15 | 80 % | 0 % | 0 % | 20 % | 0 % | Non-Coding |
17 | NC_017755 | GAAAA | 3 | 357304 | 357317 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
18 | NC_017755 | AGAAA | 5 | 375079 | 375102 | 24 | 80 % | 0 % | 20 % | 0 % | 4 % | Non-Coding |