Tetra-nucleotide Imperfect Repeats of Brassica rapa subsp. campestris mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016125 | GAAA | 3 | 506 | 517 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35352672 |
| 2 | NC_016125 | ATCT | 3 | 2549 | 2559 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35352672 |
| 3 | NC_016125 | CTTT | 3 | 3958 | 3969 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 35352672 |
| 4 | NC_016125 | TCAA | 3 | 3974 | 3986 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 35352672 |
| 5 | NC_016125 | TCAA | 3 | 7890 | 7902 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 35352672 |
| 6 | NC_016125 | AAGC | 3 | 15129 | 15140 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 35352672 |
| 7 | NC_016125 | AAGA | 4 | 15386 | 15401 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 35352672 |
| 8 | NC_016125 | TTTA | 3 | 15544 | 15555 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 35352672 |
| 9 | NC_016125 | CTAT | 3 | 17534 | 17545 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35352672 |
| 10 | NC_016125 | GCCA | 3 | 19455 | 19465 | 11 | 25 % | 0 % | 25 % | 50 % | 9 % | 35352672 |
| 11 | NC_016125 | TTCC | 3 | 23048 | 23058 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 35352672 |
| 12 | NC_016125 | GGTC | 3 | 23436 | 23447 | 12 | 0 % | 25 % | 50 % | 25 % | 8 % | 35352672 |
| 13 | NC_016125 | CTTT | 3 | 24280 | 24291 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35352672 |
| 14 | NC_016125 | GAAT | 3 | 25350 | 25361 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35352672 |
| 15 | NC_016125 | AGAA | 3 | 25768 | 25780 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35352672 |
| 16 | NC_016125 | GCAT | 3 | 33826 | 33837 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35352672 |
| 17 | NC_016125 | AGCT | 3 | 35157 | 35167 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35352672 |
| 18 | NC_016125 | GTAG | 3 | 38765 | 38776 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 35352672 |
| 19 | NC_016125 | AAGA | 3 | 41097 | 41108 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 35352672 |
| 20 | NC_016125 | CATT | 3 | 42218 | 42229 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35352672 |
| 21 | NC_016125 | CATT | 3 | 42660 | 42671 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35352672 |
| 22 | NC_016125 | AGTG | 3 | 43630 | 43641 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 35352672 |
| 23 | NC_016125 | GCAA | 3 | 46810 | 46820 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 35352672 |
| 24 | NC_016125 | TCAT | 3 | 48191 | 48202 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 35352672 |
| 25 | NC_016125 | AAAG | 3 | 50465 | 50476 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35352672 |
| 26 | NC_016125 | GCTA | 3 | 54158 | 54169 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35352672 |
| 27 | NC_016125 | AAGA | 3 | 56086 | 56097 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35352672 |
| 28 | NC_016125 | TGAA | 3 | 61910 | 61921 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35352672 |
| 29 | NC_016125 | AAAG | 3 | 74197 | 74208 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35352672 |
| 30 | NC_016125 | CATT | 3 | 75402 | 75413 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 35352672 |
| 31 | NC_016125 | GATT | 3 | 82600 | 82611 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 35352672 |
| 32 | NC_016125 | GAAA | 3 | 83142 | 83153 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35352672 |
| 33 | NC_016125 | TTCT | 3 | 87357 | 87368 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35352672 |
| 34 | NC_016125 | CTTT | 3 | 89434 | 89446 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 35352672 |
| 35 | NC_016125 | CCAA | 3 | 89962 | 89973 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | 35352672 |
| 36 | NC_016125 | TTTA | 3 | 90290 | 90301 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 35352672 |
| 37 | NC_016125 | TTCT | 3 | 96003 | 96015 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 35352672 |
| 38 | NC_016125 | ATAG | 3 | 98568 | 98578 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 35352672 |
| 39 | NC_016125 | AAGA | 3 | 99211 | 99223 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35352672 |
| 40 | NC_016125 | TTTG | 3 | 99538 | 99548 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 35352672 |
| 41 | NC_016125 | TCAT | 3 | 102504 | 102514 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35352672 |
| 42 | NC_016125 | CTTC | 3 | 103419 | 103430 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 35352672 |
| 43 | NC_016125 | TCTT | 3 | 105904 | 105915 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35352672 |
| 44 | NC_016125 | CATT | 3 | 106675 | 106685 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35352672 |
| 45 | NC_016125 | TTTG | 3 | 110329 | 110340 | 12 | 0 % | 75 % | 25 % | 0 % | 0 % | 35352672 |
| 46 | NC_016125 | TGAA | 3 | 114696 | 114708 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 35352672 |
| 47 | NC_016125 | TTTG | 3 | 115452 | 115463 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 35352672 |
| 48 | NC_016125 | TTTC | 3 | 116108 | 116119 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35352672 |
| 49 | NC_016125 | AAGG | 3 | 116721 | 116731 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 35352672 |
| 50 | NC_016125 | AAGA | 3 | 119155 | 119167 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35352672 |
| 51 | NC_016125 | AAGA | 3 | 119193 | 119205 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35352672 |
| 52 | NC_016125 | AAGA | 3 | 119231 | 119243 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35352672 |
| 53 | NC_016125 | CTTT | 3 | 119287 | 119297 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 35352672 |
| 54 | NC_016125 | GTTC | 5 | 120081 | 120101 | 21 | 0 % | 50 % | 25 % | 25 % | 9 % | 35352672 |
| 55 | NC_016125 | TTTG | 3 | 120806 | 120816 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 35352672 |
| 56 | NC_016125 | TTTC | 3 | 129284 | 129295 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35352672 |
| 57 | NC_016125 | AAAC | 3 | 130716 | 130727 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 35352672 |
| 58 | NC_016125 | GCGA | 3 | 131242 | 131253 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 35352672 |
| 59 | NC_016125 | TTCC | 3 | 131768 | 131778 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 35352672 |
| 60 | NC_016125 | GGAA | 3 | 133124 | 133136 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | 35352672 |
| 61 | NC_016125 | GAAT | 3 | 137978 | 137989 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35352672 |
| 62 | NC_016125 | TGAC | 3 | 138287 | 138298 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35352672 |
| 63 | NC_016125 | TTTC | 3 | 141844 | 141855 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35352672 |
| 64 | NC_016125 | AAAC | 3 | 145580 | 145591 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 35352672 |
| 65 | NC_016125 | AGTC | 3 | 150043 | 150054 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35352672 |
| 66 | NC_016125 | TCAG | 3 | 151828 | 151838 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35352672 |
| 67 | NC_016125 | GTCC | 3 | 151900 | 151910 | 11 | 0 % | 25 % | 25 % | 50 % | 9 % | 35352672 |
| 68 | NC_016125 | TCCC | 3 | 153457 | 153467 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 35352672 |
| 69 | NC_016125 | TTGC | 3 | 154392 | 154402 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 35352672 |
| 70 | NC_016125 | AGAT | 3 | 154692 | 154704 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 35352672 |
| 71 | NC_016125 | GTGG | 3 | 158570 | 158581 | 12 | 0 % | 25 % | 75 % | 0 % | 8 % | 35352672 |
| 72 | NC_016125 | ATGA | 3 | 159060 | 159071 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35352672 |
| 73 | NC_016125 | ATGA | 3 | 160296 | 160307 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35352672 |
| 74 | NC_016125 | TTAT | 3 | 170208 | 170218 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 35352672 |
| 75 | NC_016125 | TGGA | 3 | 172103 | 172113 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 35352672 |
| 76 | NC_016125 | AAAG | 3 | 174398 | 174408 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 35352672 |
| 77 | NC_016125 | AAAT | 3 | 174551 | 174562 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 35352672 |
| 78 | NC_016125 | TTGG | 3 | 176343 | 176353 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 35352672 |
| 79 | NC_016125 | CCAA | 3 | 177598 | 177610 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 35352672 |
| 80 | NC_016125 | CAAG | 3 | 181279 | 181289 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 35352672 |
| 81 | NC_016125 | TCCA | 3 | 185331 | 185341 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 35352672 |
| 82 | NC_016125 | AAAG | 3 | 185986 | 185996 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 35352672 |
| 83 | NC_016125 | TTTG | 3 | 186545 | 186556 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 35352672 |
| 84 | NC_016125 | GTGA | 3 | 188743 | 188753 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 35352672 |
| 85 | NC_016125 | CAGA | 3 | 189222 | 189233 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 35352672 |
| 86 | NC_016125 | AGAA | 3 | 191107 | 191118 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35352672 |
| 87 | NC_016125 | GTAA | 3 | 193223 | 193234 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35352672 |
| 88 | NC_016125 | TTCA | 3 | 195816 | 195828 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 35352672 |
| 89 | NC_016125 | GATC | 3 | 196925 | 196935 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35352672 |
| 90 | NC_016125 | CCTT | 3 | 198895 | 198905 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 35352672 |
| 91 | NC_016125 | AATG | 4 | 199230 | 199245 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 35352672 |
| 92 | NC_016125 | GCCG | 3 | 202884 | 202895 | 12 | 0 % | 0 % | 50 % | 50 % | 0 % | 35352672 |
| 93 | NC_016125 | GTAT | 3 | 204967 | 204977 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 35352672 |
| 94 | NC_016125 | ATTC | 3 | 213329 | 213340 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35352672 |
| 95 | NC_016125 | AAGC | 3 | 215629 | 215639 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 35352672 |
| 96 | NC_016125 | CACT | 3 | 218695 | 218706 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 35352672 |
| 97 | NC_016125 | AATG | 5 | 218902 | 218924 | 23 | 50 % | 25 % | 25 % | 0 % | 8 % | 35352672 |