Hexa-nucleotide Imperfect Repeats of Zea mays subsp. parviglumis mitochondrion
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_008332 | GAATGG | 4 | 27413 | 27436 | 24 | 33.33 % | 16.67 % | 50 % | 0 % | 8 % | Non-Coding |
2 | NC_008332 | CGTAAA | 3 | 102993 | 103011 | 19 | 50 % | 16.67 % | 16.67 % | 16.67 % | 10 % | 11415164 |
3 | NC_008332 | AAAGAA | 3 | 104754 | 104772 | 19 | 83.33 % | 0 % | 16.67 % | 0 % | 10 % | 11415164 |
4 | NC_008332 | ATACTA | 4 | 110465 | 110488 | 24 | 50 % | 33.33 % | 0 % | 16.67 % | 8 % | 11415164 |
5 | NC_008332 | TCTTTA | 3 | 111289 | 111306 | 18 | 16.67 % | 66.67 % | 0 % | 16.67 % | 0 % | 11415164 |
6 | NC_008332 | ACTTAG | 4 | 121686 | 121708 | 23 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 8 % | 11415163 |
7 | NC_008332 | TATAGA | 3 | 122578 | 122595 | 18 | 50 % | 33.33 % | 16.67 % | 0 % | 0 % | 11415163 |
8 | NC_008332 | GGGAGA | 3 | 123479 | 123497 | 19 | 33.33 % | 0 % | 66.67 % | 0 % | 10 % | 11415163 |
9 | NC_008332 | AGTACT | 3 | 129475 | 129492 | 18 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 0 % | 11415163 |
10 | NC_008332 | TATTAC | 5 | 131158 | 131193 | 36 | 33.33 % | 50 % | 0 % | 16.67 % | 8 % | 11415163 |
11 | NC_008332 | AATGGA | 4 | 131188 | 131211 | 24 | 50 % | 16.67 % | 33.33 % | 0 % | 8 % | 11415163 |
12 | NC_008332 | AGGAGA | 3 | 134586 | 134603 | 18 | 50 % | 0 % | 50 % | 0 % | 5 % | 11415163 |
13 | NC_008332 | GCATAG | 3 | 140515 | 140531 | 17 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 5 % | 11415163 |
14 | NC_008332 | TCGTAG | 3 | 141594 | 141610 | 17 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 5 % | 11415163 |
15 | NC_008332 | GTACTA | 3 | 142373 | 142390 | 18 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 0 % | 11415163 |
16 | NC_008332 | TAGTAA | 7 | 165068 | 165109 | 42 | 50 % | 33.33 % | 16.67 % | 0 % | 9 % | 11415163 |
17 | NC_008332 | ATGAGT | 3 | 178510 | 178527 | 18 | 33.33 % | 33.33 % | 33.33 % | 0 % | 0 % | 11415163 |
18 | NC_008332 | TTCTAT | 3 | 217569 | 217586 | 18 | 16.67 % | 66.67 % | 0 % | 16.67 % | 0 % | 11415163 |
19 | NC_008332 | TCTTAT | 5 | 222169 | 222198 | 30 | 16.67 % | 66.67 % | 0 % | 16.67 % | 0 % | 11415163 |
20 | NC_008332 | GTATTC | 4 | 229940 | 229963 | 24 | 16.67 % | 50 % | 16.67 % | 16.67 % | 4 % | 11415163 |
21 | NC_008332 | CTAGCC | 3 | 235896 | 235912 | 17 | 16.67 % | 16.67 % | 16.67 % | 50 % | 5 % | 11415163 |
22 | NC_008332 | CCCGTA | 3 | 241517 | 241533 | 17 | 16.67 % | 16.67 % | 16.67 % | 50 % | 5 % | 11415163 |
23 | NC_008332 | CCAGTA | 3 | 271388 | 271405 | 18 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 5 % | 11415163 |
24 | NC_008332 | GGACAG | 3 | 290706 | 290722 | 17 | 33.33 % | 0 % | 50 % | 16.67 % | 5 % | 11415163 |
25 | NC_008332 | TCTCTG | 3 | 296402 | 296418 | 17 | 0 % | 50 % | 16.67 % | 33.33 % | 5 % | 11415163 |
26 | NC_008332 | TTACCA | 3 | 297597 | 297613 | 17 | 33.33 % | 33.33 % | 0 % | 33.33 % | 5 % | 11415163 |
27 | NC_008332 | TCATAG | 3 | 301956 | 301972 | 17 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 5 % | 11415163 |
28 | NC_008332 | ACAGGA | 3 | 309464 | 309480 | 17 | 50 % | 0 % | 33.33 % | 16.67 % | 5 % | 11415163 |
29 | NC_008332 | ATAAGG | 3 | 317620 | 317637 | 18 | 50 % | 16.67 % | 33.33 % | 0 % | 0 % | 11415163 |
30 | NC_008332 | CTCTCG | 4 | 319760 | 319783 | 24 | 0 % | 33.33 % | 16.67 % | 50 % | 4 % | 11415163 |
31 | NC_008332 | AGGAAG | 3 | 321630 | 321648 | 19 | 50 % | 0 % | 50 % | 0 % | 5 % | 11415163 |
32 | NC_008332 | TTCTTT | 3 | 328849 | 328867 | 19 | 0 % | 83.33 % | 0 % | 16.67 % | 10 % | 11415163 |
33 | NC_008332 | TTGGCT | 3 | 329052 | 329069 | 18 | 0 % | 50 % | 33.33 % | 16.67 % | 5 % | 11415163 |
34 | NC_008332 | CTATCT | 3 | 333750 | 333767 | 18 | 16.67 % | 50 % | 0 % | 33.33 % | 5 % | 11415163 |
35 | NC_008332 | GAAAAA | 3 | 342094 | 342112 | 19 | 83.33 % | 0 % | 16.67 % | 0 % | 10 % | 11415163 |
36 | NC_008332 | GCAGAA | 4 | 342490 | 342512 | 23 | 50 % | 0 % | 33.33 % | 16.67 % | 8 % | 11415163 |
37 | NC_008332 | TCCAGT | 3 | 343466 | 343483 | 18 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 5 % | 11415163 |
38 | NC_008332 | AAGCTA | 3 | 353149 | 353167 | 19 | 50 % | 16.67 % | 16.67 % | 16.67 % | 10 % | 11415163 |
39 | NC_008332 | CAGATA | 3 | 356673 | 356690 | 18 | 50 % | 16.67 % | 16.67 % | 16.67 % | 0 % | 11415163 |
40 | NC_008332 | TCTTCA | 3 | 361123 | 361140 | 18 | 16.67 % | 50 % | 0 % | 33.33 % | 5 % | 11415163 |
41 | NC_008332 | TATATT | 3 | 371931 | 371948 | 18 | 33.33 % | 66.67 % | 0 % | 0 % | 5 % | 11415163 |
42 | NC_008332 | AGCTTT | 4 | 386184 | 386207 | 24 | 16.67 % | 50 % | 16.67 % | 16.67 % | 4 % | 11415163 |
43 | NC_008332 | AGCTTT | 3 | 386235 | 386252 | 18 | 16.67 % | 50 % | 16.67 % | 16.67 % | 5 % | 11415163 |
44 | NC_008332 | CATTTT | 3 | 386334 | 386351 | 18 | 16.67 % | 66.67 % | 0 % | 16.67 % | 5 % | 11415163 |
45 | NC_008332 | TACTCT | 4 | 391022 | 391045 | 24 | 16.67 % | 50 % | 0 % | 33.33 % | 8 % | 11415163 |
46 | NC_008332 | ATTTCT | 3 | 393074 | 393091 | 18 | 16.67 % | 66.67 % | 0 % | 16.67 % | 5 % | 11415163 |
47 | NC_008332 | TTCTGG | 3 | 396364 | 396381 | 18 | 0 % | 50 % | 33.33 % | 16.67 % | 0 % | 11415163 |
48 | NC_008332 | TTCTTT | 3 | 409477 | 409495 | 19 | 0 % | 83.33 % | 0 % | 16.67 % | 10 % | 11415163 |
49 | NC_008332 | TTCAAT | 3 | 411487 | 411505 | 19 | 33.33 % | 50 % | 0 % | 16.67 % | 5 % | 11415163 |
50 | NC_008332 | TTCCAT | 3 | 411976 | 411993 | 18 | 16.67 % | 50 % | 0 % | 33.33 % | 0 % | 11415163 |
51 | NC_008332 | ATGGCA | 4 | 417117 | 417139 | 23 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 8 % | 11415163 |
52 | NC_008332 | ACCATA | 7 | 420624 | 420664 | 41 | 50 % | 16.67 % | 0 % | 33.33 % | 9 % | 11415163 |
53 | NC_008332 | TTAGTT | 3 | 423138 | 423155 | 18 | 16.67 % | 66.67 % | 16.67 % | 0 % | 5 % | 11415163 |
54 | NC_008332 | ACTGAA | 3 | 430139 | 430156 | 18 | 50 % | 16.67 % | 16.67 % | 16.67 % | 5 % | 11415163 |
55 | NC_008332 | AAAGTA | 4 | 432757 | 432781 | 25 | 66.67 % | 16.67 % | 16.67 % | 0 % | 8 % | 11415163 |
56 | NC_008332 | TCTCTG | 3 | 443055 | 443071 | 17 | 0 % | 50 % | 16.67 % | 33.33 % | 5 % | 11415163 |
57 | NC_008332 | TTACCA | 3 | 444250 | 444266 | 17 | 33.33 % | 33.33 % | 0 % | 33.33 % | 5 % | 11415163 |
58 | NC_008332 | TCATAG | 3 | 448609 | 448625 | 17 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 5 % | 11415163 |
59 | NC_008332 | ACAGGA | 3 | 456117 | 456133 | 17 | 50 % | 0 % | 33.33 % | 16.67 % | 5 % | 11415163 |
60 | NC_008332 | ATAAGG | 3 | 464273 | 464290 | 18 | 50 % | 16.67 % | 33.33 % | 0 % | 0 % | 11415163 |
61 | NC_008332 | CTCTCG | 4 | 466413 | 466436 | 24 | 0 % | 33.33 % | 16.67 % | 50 % | 4 % | 11415163 |
62 | NC_008332 | AGGAAG | 3 | 468283 | 468301 | 19 | 50 % | 0 % | 50 % | 0 % | 5 % | 11415163 |
63 | NC_008332 | TTCTTT | 3 | 475502 | 475520 | 19 | 0 % | 83.33 % | 0 % | 16.67 % | 10 % | 11415163 |
64 | NC_008332 | TTGGCT | 3 | 475705 | 475722 | 18 | 0 % | 50 % | 33.33 % | 16.67 % | 5 % | 11415163 |
65 | NC_008332 | CTATCT | 3 | 480403 | 480420 | 18 | 16.67 % | 50 % | 0 % | 33.33 % | 5 % | 11415163 |
66 | NC_008332 | GAAAAA | 3 | 488747 | 488765 | 19 | 83.33 % | 0 % | 16.67 % | 0 % | 10 % | 11415163 |
67 | NC_008332 | GCAGAA | 4 | 489143 | 489165 | 23 | 50 % | 0 % | 33.33 % | 16.67 % | 8 % | 11415163 |
68 | NC_008332 | TCCAGT | 3 | 490119 | 490136 | 18 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 5 % | 11415163 |
69 | NC_008332 | AGAGAA | 3 | 490994 | 491011 | 18 | 66.67 % | 0 % | 33.33 % | 0 % | 5 % | 11415163 |
70 | NC_008332 | TACTAA | 3 | 499525 | 499543 | 19 | 50 % | 33.33 % | 0 % | 16.67 % | 5 % | 11415163 |
71 | NC_008332 | CTTTAT | 3 | 502975 | 502992 | 18 | 16.67 % | 66.67 % | 0 % | 16.67 % | 0 % | 11415163 |
72 | NC_008332 | TCCTTA | 4 | 505633 | 505656 | 24 | 16.67 % | 50 % | 0 % | 33.33 % | 0 % | 11415163 |
73 | NC_008332 | TATAGA | 6 | 505984 | 506019 | 36 | 50 % | 33.33 % | 16.67 % | 0 % | 8 % | 11415163 |
74 | NC_008332 | CTATAA | 3 | 515173 | 515190 | 18 | 50 % | 33.33 % | 0 % | 16.67 % | 0 % | 11415163 |
75 | NC_008332 | TTCATT | 4 | 516488 | 516511 | 24 | 16.67 % | 66.67 % | 0 % | 16.67 % | 8 % | 11415163 |
76 | NC_008332 | ACAATG | 3 | 520393 | 520410 | 18 | 50 % | 16.67 % | 16.67 % | 16.67 % | 5 % | 11415163 |
77 | NC_008332 | TTACTT | 4 | 530715 | 530737 | 23 | 16.67 % | 66.67 % | 0 % | 16.67 % | 8 % | 11415163 |
78 | NC_008332 | CCTTTT | 3 | 531242 | 531260 | 19 | 0 % | 66.67 % | 0 % | 33.33 % | 10 % | 11415163 |
79 | NC_008332 | TTCAGT | 3 | 533334 | 533351 | 18 | 16.67 % | 50 % | 16.67 % | 16.67 % | 5 % | 11415163 |
80 | NC_008332 | CTATTC | 3 | 535577 | 535594 | 18 | 16.67 % | 50 % | 0 % | 33.33 % | 5 % | 11415163 |
81 | NC_008332 | AACTAA | 3 | 540335 | 540352 | 18 | 66.67 % | 16.67 % | 0 % | 16.67 % | 5 % | 11415163 |
82 | NC_008332 | TATGGT | 7 | 542826 | 542866 | 41 | 16.67 % | 50 % | 33.33 % | 0 % | 9 % | 11415163 |
83 | NC_008332 | TGCCAT | 4 | 546351 | 546373 | 23 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 8 % | 11415163 |
84 | NC_008332 | ATGGAA | 3 | 551497 | 551514 | 18 | 50 % | 16.67 % | 33.33 % | 0 % | 0 % | 11415163 |
85 | NC_008332 | ATTGAA | 3 | 551985 | 552003 | 19 | 50 % | 33.33 % | 16.67 % | 0 % | 5 % | 11415163 |
86 | NC_008332 | AAAAAG | 3 | 553993 | 554011 | 19 | 83.33 % | 0 % | 16.67 % | 0 % | 10 % | 11415163 |
87 | NC_008332 | TTTCAC | 3 | 560013 | 560030 | 18 | 16.67 % | 50 % | 0 % | 33.33 % | 5 % | 11415163 |
88 | NC_008332 | CAGAAC | 3 | 567110 | 567127 | 18 | 50 % | 0 % | 16.67 % | 33.33 % | 5 % | 11415163 |
89 | NC_008332 | CACAAG | 3 | 568826 | 568843 | 18 | 50 % | 0 % | 16.67 % | 33.33 % | 5 % | 11415163 |
90 | NC_008332 | AGAGTA | 4 | 572445 | 572468 | 24 | 50 % | 16.67 % | 33.33 % | 0 % | 8 % | 11415163 |
91 | NC_008332 | AATCTA | 3 | 580921 | 580938 | 18 | 50 % | 33.33 % | 0 % | 16.67 % | 0 % | 11415163 |
92 | NC_008332 | GAATGG | 4 | 621863 | 621886 | 24 | 33.33 % | 16.67 % | 50 % | 0 % | 8 % | 11415163 |
93 | NC_008332 | TAAGTG | 3 | 636502 | 636519 | 18 | 33.33 % | 33.33 % | 33.33 % | 0 % | 0 % | 11415164 |
94 | NC_008332 | AAGAAA | 3 | 640624 | 640642 | 19 | 83.33 % | 0 % | 16.67 % | 0 % | 5 % | 11415164 |
95 | NC_008332 | GTGAAA | 3 | 646978 | 646995 | 18 | 50 % | 16.67 % | 33.33 % | 0 % | 0 % | 11415164 |
96 | NC_008332 | CCATAG | 3 | 651174 | 651190 | 17 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 5 % | 11415164 |
97 | NC_008332 | TAGGGT | 7 | 654984 | 655025 | 42 | 16.67 % | 33.33 % | 50 % | 0 % | 7 % | 11415164 |
98 | NC_008332 | TTCCTT | 4 | 659592 | 659615 | 24 | 0 % | 66.67 % | 0 % | 33.33 % | 4 % | 11415164 |
99 | NC_008332 | ATTCTG | 3 | 677031 | 677048 | 18 | 16.67 % | 50 % | 16.67 % | 16.67 % | 5 % | Non-Coding |